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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [167 aa] | Ras-related protein Rab-11A :RB11A_HUMAN | |
2 | b | I 1 (B) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(N) 33F 34S(N) 35N(L) 37Y(S) 39A(S) 40T 65A 66G 67Q(L) 125N 126K 128D 129L 155S 156A 157K(L) (identity: 66.7 %/42.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2d7c_B_1 identity=42.0% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* ** ******* * * * *** * * ** ******* ** * **** ** * * * * : 2d7c_B_1 5:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 104 SecStr :EEEEEEE TTSSHHHHHHHHHHS TT SEEEEEEEEEETTEEEEEEEEEE S SS TTHHHHHTT EEEEEEETT HHHHHTHHHHHHHHH: ExpBur :ebbbbbbbbeebbbebbbbbbbeeeeeeeeeebeeeeebeeebebeeeebebebebbbbeeeeeeebeebbeebebbbbbbbbbeeebbebbeebbebbe: Contact : bbbbbbbb bbb b bb bbb queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169 : * * *** ** * * * * * ** **** *** *****: 2d7c_B_1 105:DHADS----NIVIULVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 162 SecStr :HHS T----T EEEEEEE TT GGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHH: ExpBur :eebee----ebbbbbbbbebeeeeeeebeeeebeebb-eebebeebbbbbeeeeebeebbeeb: Contact : bb bb bbb |