Protein Model on 4rkf_B_1_G_1
(TEMPLATE: 
4rkf
)Protein Model on 4rkf_B_1_G_1
(TEMPLATE: 4rkf
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [172 aa] | Ras-related protein Rab-3 :RAB3_DROME | |
| 2 | b | G 1 (B) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D(N) 17S 18G(S) 19V 20G 21K 22T 23S 33F 34S(T) 35N(S) 36Q(A) 37Y(F) 39A(S) 40T 65A 66G 125N 126K 128D 129L(M) 155S 156A 157K (identity: 66.7 %/35.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4rkf_B_1 identity=35.8% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
: * * * * ***** * * * * ** * * * * ******* ** * **** * *** * * :
4rkf_B_1 23:MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDW----V: 118
SecStr :EEEEEEEESTTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTT TT SEEEEEEETT HHHHHTHHHH----H:
ExpBur :ebbbbbbbbeebbbeebbebbbeeeeeeeeeebebbeeeeeeeeeeeeebebebbbbbbeeebeeebbeebeebbbbbbbbbbeeeebbeebeeb----b:
Contact : bbbbbbbb bbbbb bb bb
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: * * *** * * * ******* ** * :
4rkf_B_1 119:TQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLV: 181
SecStr :HHHHHHS TT EEEEEEE TT GGG S HHHHHHHHHHHT EEEE BTTTTBSHHHHHHHHH:
ExpBur :eebeeebeeebebbbbbbebeeeeeeebeeeebeebbeeeeeebbbbbbeeeeebeebbeebb:
Contact : bb bb bbb
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[assembly_id:2]
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