Protein Model on 8alk_B_1_F_1
(TEMPLATE: 
8alk
)Protein Model on 8alk_B_1_F_1
(TEMPLATE: 8alk
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [163 aa] | Ras-related protein Rab-1B :RAB1B_HUMAN | |
| 2 | b | F 1 (B) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 63D 125N 126K 128D 129L 155S 156A 157K (identity: 82.4 %/37.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8alk_B_1 identity=37.1% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * ** * *********** **** * *** * * :
8alk_B_1 9:LFKLLLIGDSGVGKSCLLLRFADDTYTXXXXXXXXVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSTYYRGAHGIIVVYDVTDQESYANVKQWLQEID: 108
SecStr :EEEEEEESSTTSSHHHHHHHHHT -------- EEEEEEEETTEEEEEEEEE TTGGGT S S SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbebbbbeebbbbebbbbbeeeeee--------eeeeeeebeeeeeebebbbebeeeeeeeeeeeeeeeeeeebbbbbbbbeeeebbeebeeebeebe:
Contact : bbbbbbbb b b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: * ** *** ** * ** ***** * ****** * *:
8alk_B_1 109:RYAX----ENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA: 167
SecStr :HH ----- EEEEEEE TT TTT S HHHHHHHHHHTT EEE BTTTTBTHHHHHHHHH:
ExpBur :eee-----eebeebbbbbebeeeeeeebeeeebeeebeeeebebebbbbeeeeebeebbeebb:
Contact : bb bb bbb
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[assembly_id:1]
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