Protein Model on 7opp_B_1_F_1 (TEMPLATE: 7opp )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) B 1 (C) polymer(polypeptide(L)) [209 aa] Synaptotagmin-like protein 2,Ras-related protein Rab-27A :SYTL2_HUMAN:RB27A_HUMAN
2 b F 1 (C) non-polymer(MG) MAGNESIUM ION 22T 40T (identity: 100.0 %/40.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7opp_B_1 identity=40.9%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD----------DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFK:  97
                :* *   **********   **   **      * * **  * *                   * ***** *** **  ** * *    * ** *    * :
7opp_B_1      47:LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASXXXXXTGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFL: 146
SecStr          :EEEEEEE STTSSHHHHHHHHHHS    S     SEEEEEEEEEEE  -----   EEEEEEEEEEE  SGGGHHHHHTTGGG SSEEEEEETT HHHHH:    
ExpBur          :bbbbbbbbbeebbbeebbbbbbeeeeeeeeeebebbebeeeebebeee-----eeebeebbbbbbbbbbeebbeeebbebbebbebbbbbbbbeeeebbe:    
Contact         :              b                 b                                                                   

queryA        98:TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
                :    *       *    *     *  *** ***   *           *  ********    *  **    :
7opp_B_1     147:NVRNWISQLQMHAYSENPD---IVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEML: 215
SecStr          :THHHHHHHHHHHSSSSS  ---EEEEEE TT  TT  S HHHHHHHHHHHT  EEE  TTT TTHHHHHHHH:    
ExpBur          :ebeebbeebeeebeeeebe---bbbbbbebeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbeeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123