CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [160 aa] | Ras-related protein Rab-11B :RB11B_HUMAN | |
2 | b | F 1 (B) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(N) 33F 34S(N) 35N(L) 36Q(E) 125N 126K 128D 129L 155S 156A 157K(L) (identity: 68.4 %/37.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4ojk_B_1 identity=37.6% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* ** ******* * * ** * * ** ***** * **** ** * * * * : 4ojk_B_1 6:LFKVVLIGDSGVGKSNLLSRFTRNEFNLEXXXXIGVEFATRSIQVDGKTIKAQIWDTXXXXXXXXITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 105 SecStr :EEEEEEESSTTSSHHHHHHHHHH ---- EEEEEEEEETTEEEEEEEEE -------- HHHHHTT EEEEEEETTBHHHHHTHHHHHHHHH: ExpBur :ebbbbbbbbeebbbebbbbbbbeeeeeee----eeeeebeeebebeeebbebbbbbe--------eeeebbeebebbbbbbbbbeeebbeebeeebeebe: Contact : bbbbbbbb bbbb queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169 : * * *** ** * * * * * *** **** *** ** *: 4ojk_B_1 106:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNNLSFIETSALDSTNVEEAFKNI: 163 SecStr :HHS T----T EEEEEEE GGGGGG S HHHHHHHH-HHTT EEEE BTTTTBSHHHHHHHH: ExpBur :eeeee----ebbbbbbbbebeeeeeeebeeeebeeeb-eeeebebbbbbbeeeeebeebbeeb: Contact : bb bb bbb |