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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [176 aa] | Ras-related protein Rab-27B :RB27B_HUMAN | |
2 | b | F 1 (B) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T 23S(T) 125N 126K 128D 129L 155S 156A 157K(A) (identity: 86.7 %/41.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2f7s_B_1 identity=41.5% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL----------VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFK: 97 :* * ********* * ** * * ** * * * * ********* ** ** * * * ** * * : 2f7s_B_1 25:LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAXXXXXXXXKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFL: 124 SecStr : EEEEE TTSSHHHHHHHHT S EEEEEEEEEEE -------- EEEEEEEEEEE HHHHHHHHHHHHTT EEEEEEETT HHHHH: ExpBur :eeeebbbeeeebbeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeeee--------eeeeeeeeeeeeebeeeeeeeeeeeeeebebbbbbbbbbeeebbe: Contact : bbbbbbbb queryA 98:TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169 : * * * * *** ** * * ******** *** * * : 2f7s_B_1 125:NVRNWMSQLQANAYCENPD---IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETL: 193 SecStr :HHHHHTTS TTT E---EEEEEE TT TTT S HHHHHHHHHHTT EEEE TTT TTHHHHHHHH: ExpBur :ebeeebeeeeeeeeeeeeb---bbbbbbeeeeeeeeebebeebeebbeeeebebbbbbbeeeeebeebbeeb: Contact : bb bb bbb |