Protein Model on 2if0_B_1_E_1 (TEMPLATE: 2if0 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2] [assembly_id:3]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) B 1 (B) polymer(polypeptide(L)) [175 aa] Ras-related protein Rab-27B :RB27B_MOUSE
2 b E 1 (B) non-polymer(MG) MAGNESIUM ION 22T (identity: 100.0 %/39.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2if0_B_1 identity=39.8%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL----------VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFK:  97
                :* *   *********     *   **      * * **  * *  *             *  * ***** *** **  ** * *    * ** *    * :
2if0_B_1      11:LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDXXXXXXXXXXAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFL: 110
SecStr          :   EEEEE TTSSHHHHHHHHH  S         EEEEEEEEEE  ----------  EEEEEEEEEESHHHHHHHHHHHHTT  EEEEEEETT HHHHH:    
ExpBur          :eeeebbbeeeebbeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeee----------eeeeeeeeeeeeeeeeeeeeeeeeeeebbbbbbbbbbbeeebbe:    
Contact         :              b                                                                                     

queryA        98:TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
                :    *       *    *     *  *** **        *       *  ********    ***    *      * :
2if0_B_1     111:NVRNWMSQLQANAYCENPD---IVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKR: 186
SecStr          :HHHHHHHT     TTTS E---EEEEEE TT GGG  S HHHHHHHHHHHT  EEE  TTT TTHHHHHHHHHHHHHHH:    
ExpBur          :ebeeebeeeeeeeeeeeeb---bbbbbbebeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbeebeeebbeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123