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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [175 aa] | Ras-related protein Rab-27B :RB27B_MOUSE | |
2 | b | E 1 (B) | non-polymer(MG) | MAGNESIUM ION | 22T (identity: 100.0 %/39.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2if0_B_1 identity=39.8% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL----------VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFK: 97 :* * ********* * ** * * ** * * * * * ***** *** ** ** * * * ** * * : 2if0_B_1 11:LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDXXXXXXXXXXAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFL: 110 SecStr : EEEEE TTSSHHHHHHHHH S EEEEEEEEEE ---------- EEEEEEEEEESHHHHHHHHHHHHTT EEEEEEETT HHHHH: ExpBur :eeeebbbeeeebbeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeee----------eeeeeeeeeeeeeeeeeeeeeeeeeeebbbbbbbbbbbeeebbe: Contact : b queryA 98:TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176 : * * * * *** ** * * ******** *** * * : 2if0_B_1 111:NVRNWMSQLQANAYCENPD---IVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKR: 186 SecStr :HHHHHHHT TTTS E---EEEEEE TT GGG S HHHHHHHHHHHT EEE TTT TTHHHHHHHHHHHHHHH: ExpBur :ebeeebeeeeeeeeeeeeb---bbbbbbebeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbeebeeebbeb: |