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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (Y) | polymer(polypeptide(L)) [197 aa] | GTP-binding protein YPT1 :YPT1_YEAST | |
2 | b | E 1 (Y) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D(N) 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 34S(T) 36Q(D) 37Y 68E 125N 126K 128D 129L 155S 156A 157K(L) (identity: 65.0 %/38.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1ukv_B_1 identity=38.8% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * * ***** * * * *** ** * * * * *********** *** * *** * * * : 1ukv_B_1 8:LFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEID: 107 SecStr :EEEEEEEESTTSSHHHHHHHHHHS TT SS EEEEEEEETTEEEEEEEE TTTTTTT HHHHTT SEEEEEEETT HHHHHHHHHHHHHHH: ExpBur :ebebbbbbbeebbbebbbbbbeeeeeeeeeeeeeebeeeeeebebeeebbebebebbeeebeeeebeeebbeebebbbbbbbbeeeebbebbebbbebbe: Contact : bbbbbbbb bb bb b queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 : * *** ** * * * **** *** ** * **: 1ukv_B_1 108:RYATS----TVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMAR: 167 SecStr :HHS T----T EEEEEEE TT TTT S HHHHHHHHHHTT EEE TTT TTHHHHHHHHHH: ExpBur :eebee----ebbbbbbbbebeeeeeeebeeeebeeebeeeebebebbbbeeeeebeebbbebbe: Contact : bb bb bbb |