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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [171 aa] | Ras-related protein Rab-8A :RAB8A_HUMAN | |
2 | b | D 1 (D) | polymer(polypeptide(L)) [69 aa] | Guanine nucleotide exchange factor for Rab-3A :R3GEF_HUMAN | 36Q(T) 37Y(F) 40T 41I 69R 70F 71Q(R) 72S(T) 73L(I) (identity: 44.4 %/41.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4li0_B_1 identity=41.9% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * ******** * *** ** * *********** * **** ** * * * * : 4li0_B_1 10:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 109 SecStr :EEEEEEEESTTSSHHHHHHHHHT S STTTTSEEEEEEEEEETTEEEEEEEEEE GGGHHHHHHHHHH SEEEEEEETT HHHHHTHHHHHHHHH: ExpBur :ebbbbbbbeeebbbbebbbebbeeeeeeeebeeebbbeeebeeebeeebbbbebebbeeeeeeeeebeeebeebebbbbbbbbeeeebbeebeebbeebe: Contact : bb bb bbbbb queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172 : ** * * **** * *** * * ***** **** ** * ** : 4li0_B_1 110:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 170 SecStr :HHS S-S B --- EEEE TT TT S HHHHHHHHHHH-T EEEEBTTTTBSHHHHHHHHHHH: ExpBur :eebee-ebee---bbbbbebebeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbbbbbee: |