Protein Model on 1s8f_B_2_A_2
(TEMPLATE: 
1s8f
)Protein Model on 1s8f_B_2_A_2
(TEMPLATE: 1s8f
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 2 (B) | polymer(polypeptide(L)) [173 aa] | Ras-related protein Rab-9A :RAB9A_CANFA | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [168 aa] | Ras-related protein Rab-9A :RAB9A_CANFA | 22T(S) 25M 26N 29V 30N(T) 34S(D) 37Y(L) 38K(F) 39A(H) 40T 41I 42G 43A(V) 44D(E) 45F 46L 62W 70F 73L (identity: 57.9 %/56.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1s8f_B_2 identity=56.5% |
queryA 5:KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD: 104
:* * *** *** **** **** ** ** *** ** * ** ************** ** **** *** * * * * * * :
1s8f_B_2 6:KSSLFKVILLGDGGVGKSSLMNRYVTNKFDXXLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKK: 105
SecStr : EEEEEEEEE TTSSHHHHHHHHHHS -- EEEEEEEEEEETTEEEEEEEEEEESS HHHHHHHHTT SEEEEEEETT HHHHHTHHHHHH:
ExpBur :eebebbbbbbbbeebbbeebbbbbbeebee--eeeeebebeeeeeeeeeebebebebbbbbeeeeeeeeeeebbeebebbbbbbbbeeeebbebbeebbe:
Contact : b bb bb b bbbbbbbbbb b b b
queryA 105:EFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
:** * ** **** ****** *** * ***** ******** * ** ** * *:
1s8f_B_2 106:EFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL: 175
SecStr :HHHHHTT S GGGS EEEEEE TT S SS HHHHHHHHHHTT EEE TTT TTHHHHHHHHHHHH :
ExpBur :ebeeebebeeeeebbbbbbbbeeeeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbeebbebee:
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[assembly_id:3]
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