Protein Model on 4d0l_B_1_A_1
(TEMPLATE: 
4d0l
)Protein Model on 4d0l_B_1_A_1
(TEMPLATE: 4d0l
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [173 aa] | RAS-RELATED PROTEIN RAB-11A :RB11A_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [470 aa] | PHOSPHATIDYLINOSITOL 4-KINASE BETA :PI4KB_HUMAN | 33F 35N(L) 36Q(E) 37Y(S) 128D 129L 130E(R) 131N(H) 157K(L) (identity: 33.3 %/42.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4d0l_B_1 identity=42.0% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* ** ******* * * * *** * * ** ******* ** * **** ** * * * * :
4d0l_B_1 14:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 113
SecStr :EEEEEEEESTTSSHHHHHHHHHHS SS S EEEEEEEEETTEEEEEEEEE S GGGHHHHGGGGTT SEEEEEEETT HHHHHTHHHHHHTHH:
ExpBur :ebbbbbbbbeebbbebbbbbbeeeeeeeeeeebebeeebeeebebeeeebebebbbbbbeeeeeeebbeebeebebbbbbbbbbeeebbeebeebeebbe:
Contact : b bbb
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * *** ** * * * * * ** **** *** *****:
4d0l_B_1 114:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 171
SecStr :HHS T----T EEEEEEE TT GGG S HHHHHHHH-HHTT EEEEE TTT TTHHHHHHHH:
ExpBur :eebee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbeeb:
Contact : bbbbb b
|
[assembly_id:1]
[help]