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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [152 aa] | Small GTP-binding protein-like :Q9SN68_ARATH | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [246 aa] | Similarity to vacuolar protein sorting-associated protein VPS9 :Q9LT31_ARATH | 17S(V) 21K 22T(S) 23S 43A 44D(A) 45F 60Q(E) 62W 63D 64T 65A 66G 67Q 69R 70F(Y) 73L 76A(M) 77F(Y) (identity: 63.2 %/40.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2efh_B_1 identity=40.1% |
queryA 10:KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ: 109 :* *** * ** ** * * * * * * ********* ** **** ***** * * * *: 2efh_B_1 14:KLVLLGDVGAGKSSLVLRFVXXXXXXXXXXXXXAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ: 113 SecStr :EEEEE TTSSHHHHHHHH ------------- EEEEEEEETTEEEEEEEE SGGGGGGHHHHHTT SEEEEEEETT HHHHHHHHHHHHHHHHH: ExpBur :bbbbbbbeebbbeebbeebe-------------eeeeeeebebeeeebebebebbebeeeebeebeeebeebebbbbbbbbbeeebbebbeebbeebeee: Contact : b bbb bbb b bbbbbb bb b bb queryA 110:ASPRDPENFPFVVLGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171 : * * *** * * * * ** * ***** * ** * ***: 2efh_B_1 114:GNP----NMVMALAGNKSDLLDARKVTAEDAQTYA-QENGLFFMETSAKTATNVKEIFYEIAR: 171 SecStr :S T----T EEEEEEE TT STT S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHHH: ExpBur :eee----ebbbbbbbbebeeeeeeebeeeebeebb-eeeebbbbebbbeeeeebeebbeebbe: |