[pdbjlvh2]Protein Model on 5euq_A

Protein Model on 5euq_A_1 (TEMPLATE: 5euq )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RAB7A_HUMAN)	A 1 (B)	polymer(polypeptide(L)) [155 aa]	Ras-related protein Rab-11A :RB11A_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5euq_A_1 identity=38.2%

queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* **   *******  *        *        *  * *    **      ******          * ****    ** *     *      *  *  :
5euq_A_1      14:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESXXXXGVEFATRSIQVDGKTIKAQIWDTAXXXXXXXXTSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 113
SecStr          :  EEEEESSTTS HHHHHHHHHT    S  ----  EEEEEEEEETTEEEEEEEEE  -------- HHHHTT  EEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbeeebebeebbebbbeeeeeeee----eeeeeeeebebeeeebebebbbee--------eeebbeebebbbbbbbbeeeebbebbeebbeebe:    

queryA       108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
                :  *      *      *** **   * * *  * *    **     ****    *** *****:
5euq_A_1     114:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 171
SecStr          :HHS T----T EEEEEEE TT GGG  S HHHHHHHH-HHTT EEEE BTTTTBTHHHHHHHH:    
ExpBur          :eebee----ebebbbbbbebeeeeeeebeeeebeeeb-eeeebebbbbbbeeeeebeebbeeb:

Protein Model on 5euq_A_1 (TEMPLATE: 5euq )

Input Residue Numbers for Focused Sites