[pdbjlvh2]Protein Model on 3bbp_A

Protein Model on 3bbp_A_1 (TEMPLATE: 3bbp )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:4]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RAB7A_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [161 aa]	Ras-related protein Rab-6A :RAB6A_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3bbp_A_1 identity=39.5%

queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                : *   **   ******        * * * **** *** *     ** *  * ***** *** **     *     * * * *  * *     * *    :
3bbp_A_1      17:FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRT: 116
SecStr          : EEEEEESTTSSHHHHHHHHHTS    S     SEEEEEEEEEETTEEEEEEEEEE  SSGGGTTHHHHHTT SEEEEEEETT HHHHHTHHHHHHHHHH:    
ExpBur          :ebbbbbbbeebbbeebbebbbeeeeeeeeeebebbeeeeeeeeeeeeebebebbbbbbbeeebeebeeebeebebbbbbbbbeeeebbeebeebbeebee:    

queryA       109:QASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :               *** **   ***             *    *****   ** * *   *:
3bbp_A_1     117:ERGS----DVIIMLVGNKTDLADKRQVSIEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVA: 174
SecStr          :HHTT----SSEEEEEEE GGG TT  S HHHHHHHH-HHTT EEEE BTTTTBTHHHHHHHHH:    
ExpBur          :eeee----ebebbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbeebe:

Protein Model on 3bbp_A_1 (TEMPLATE: 3bbp )

Input Residue Numbers for Focused Sites