[pdbjlvh2]Protein Model on 1ky3_A

Protein Model on 1ky3_A_1 (TEMPLATE: 1ky3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(RAB7A_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [162 aa]	GTP-BINDING PROTEIN YPT7P :YPT7_YEAST

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1ky3_A_1 identity=62.1%

queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
                : *****************  *** * * **   ********** ** *   *** ****          ************ ***    *    ******:
1ky3_A_1       8:ILKVIILGDSGVGKTSLMHRYVNDKYSQQYXXXIGADFLTKEVTVDGDKVATMQVWDTAXXXXXXXXXXAFYRGADCCVLVYDVTNASSFENIKSWRDEF: 107
SecStr          :EEEEEEE  TTSSHHHHHHHHHHS   TT ---   S EEEEE  SSS  EEEEEE   ----------  STT  EEEEEEETT HHHHHTHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbeebbbbbbeeeeeeee---eeeeebeeebeeeeeeebebbbbbee----------eeeeebbbbbbbbbbeeeebbeebeeebeeb:    

queryA       107:LIQASPRDPENFPFVVLGNKIDLENRQ--VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
                :*  *    ** **** ****** *     *  * **    *   ** * **** ****  **  *** ** *:
1ky3_A_1     108:LVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ: 179
SecStr          :HHHH  S TTT  EEEEEE TTS GGG  S HHHHHHHHHHTTS  EEEEBTTTTBSHHHHHHHHHHHHHHH:    
ExpBur          :eeebebeeeeebbbbbbbbeeebeeeeeebeeeebeebbeebeebebbbbbbeeeeebeebbebbbebbeee:

Protein Model on 1ky3_A_1 (TEMPLATE: 1ky3 )

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