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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [172 aa] | Ras-related protein Rab-38 :RAB38_HUMAN | |
2 | b | F 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T 40T (identity: 100.0 %/36.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6hdu_A_1 identity=36.8% |
queryA 4:RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW: 102 : * * * ** ****** ** ** * **** ** * * * * ** ** *** ** * ***** * ** *: 6hdu_A_1 8:HKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDIAGLERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKW: 107 SecStr : EEEEEEEEEEESTTSSHHHHHHHHHHS SS SEEEEEEEEEEETTEEEEEEEEEE GGGGGSS HHHHHTT EEEEEEETT HHHHHHHHHH: ExpBur :eeebebbbbbbbbeebbbeebbebbbeeeeeeeeeebebbeebebebeeeeebbbebebbbbbbebeeeeebeebbeebbbbbbbbbeeeeebeebbbeb: Contact : b b queryA 103:RDEFLIQASPRDPENFPFVVLGNKID--LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE: 177 : * * * ** * * ******* ** * * *: 6hdu_A_1 108:KNDLDSKLSLPNGKPVSVVLLANKCDQXXXXXXXXXXKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE: 184 SecStr :HHHHHHH TTS EEEEEEE TT ---------- HHHHHHHHT SEEEE BTTTTBSHHHHHHHHHHHHHHT : ExpBur :bebbeeebebeeeeebbbbbbbbebee----------ebeebbeeeebebeeebbbeeeeebeebbebbbeebeeee: |