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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [161 aa] | Ras-related protein Rab-6A :RAB6A_HUMAN | |
2 | b | F 1 (A) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 16D(E) 17S(Q) 18G(S) 19V 20G 21K 22T 23S 33F 34S(D) 35N 37Y 38K(Q) 39A 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K (identity: 79.2 %/40.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2gil_A_1 identity=40.1% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 : * ** ****** * * * **** *** * ** * * ********* ** * * * * * * * * * : 2gil_A_1 2:FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRT: 101 SecStr : EEEEE STTSSHHHHHHHHHHS SS S EEEEEEEE SSSEEEEEEEE SGGG SSHHHHHHT SEEEEEEETT HHHHHTHHHHHHHHHH: ExpBur :bbbbbbbbeebbbeebbebbbeeeeeeeeeebebeeeeeeeeebeeeebebebbbbbbeeeeeeebeeebeebebbbbbbbbeeeebbebbeebbeebee: Contact : bbbbbbbb bbb bbbb bb queryA 109:QASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170 : *** ** *** * ***** ** * * *: 2gil_A_1 102:ERGS----DVIIMLVGNKTDLADKRQVSIEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVA: 159 SecStr :HHTT----SSEEEEEEE TT GGG S HHHHHHHH-HHTT EEEE BTTTTBSHHHHHHHHH: ExpBur :eeee----ebebbbbbbebeeeeeeebbeeebeebb-eeeebebbbbbbeeeeebeebbeebb: Contact : bb bb bbb |