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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [165 aa] | Rab5a :A0A109NYM0_LEIDO | |
2 | b | E 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T(S) 63D (identity: 50.0 %/40.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6l6o_A_1 identity=40.1% |
queryA 10:KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ: 109 :* ** ** ** * * **** ** * ** * * ****** *** ** **** * * * * * * : 6l6o_A_1 17:KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRAN: 116 SecStr :EEEEEESTTSSHHHHHHHHHHS SS TTTS SEEEEEEE SSSEEEEEEE TTGGGGT HHHHTT SEEEEEEETT HHHHHHHHHHHHHHHHH: ExpBur :bbbbbbbeebbbeebbbbbbeeeeeeeeeeeeeeeebeeebeeeeeebebebebbebebeeeebeeebbeebebbbbbbbbbeeebbeebeebbeebeee: Contact : b b queryA 110:ASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170 :* * * *** ** *** * * *** **** * *: 6l6o_A_1 117:ADP----SLIIVLVGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA: 174 SecStr :S T----T EEEEEEE TT GGG S HHHHHHHHHHTT SEEEE BTTTTBSHHHHHHHHH: ExpBur :bee----ebbbbbbbbeeeeeeeeebeeeebeebbeebebeebbbbbbeeeeebeebbeebb: |