Protein Model on 2gf9_A_1_E_1
(TEMPLATE: 
2gf9
)Protein Model on 2gf9_A_1_E_1
(TEMPLATE: 2gf9
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [176 aa] | Ras-related protein Rab-3D :RAB3D_HUMAN | |
| 2 | b | E 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D(N) 17S 18G(S) 19V 20G 21K 22T 23S 33F 125N 126K 128D 129L 155S 156A 157K (identity: 87.5 %/35.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2gf9_A_1 identity=35.4% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
: * * * ***** * * * * ** * * * ********** * **** * * * * :
2gf9_A_1 22:MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDW----A: 117
SecStr :EEEEEEE STTSSHHHHHHHHHHS S EEEEEEEEETTEEEEEEEEE S SS SGGGGGTT SEEEEEEETT HHHHHTHHHH----H:
ExpBur :ebbbbbbbeeebbbeebbebbbeeeeeeeeeeeeeeeeeeeebeeeebebebebbbbbeeeeeeeebbeebeebbbbbbbbbbeeeebbebbeeb----b:
Contact : bbbbbbbb b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * *** *** * ** **** *** * * :
2gf9_A_1 118:TQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERL: 179
SecStr :HHHHHHS TT EEEEEEE TT GGG S HHHHHHHHHHHT EEEE BTTTTBSHHHHHHHH:
ExpBur :ebbeeebeeebbbbbbbbebeeeeeeebebeebeebbeeeebebebbbbeeeeebbebbeeb:
Contact : bb bb bbb
|
[assembly_id:1]
[help]