Protein Model on 2f9m_A_1_E_1 (TEMPLATE: 2f9m )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [182 aa] RAB11B, member RAS oncogene family :RB11B_HUMAN
2 b E 1 (A) non-polymer(GNP) PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 16D 17S 18G 19V 20G 21K 22T(S) 23S(N) 33F 34S(N) 35N(L) 37Y(S) 38K 39A(S) 40T 64T 65A 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 72.0 %/42.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2f9m_A_1 identity=42.0%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* **   *******  *        *    * ***  * *    **      **********      * ****    ** *     *      *  *  :
2f9m_A_1       5:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 104
SecStr          :EEEEEEES TTSSHHHHHHHHHHS   TT     SEEEEEEEEEETTEEEEEEEEEE S  SSS   HHHHTT SEEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbebbbbbbbeeeeeeeeeebeeeeebeeebebeeebbebbbbbbbbebeeeebeeebbeebebbbbbbbbeeeebbeebeebbebbe:    
Contact         :        bbbbbbbb         bbb bbbb                       bbb                                         

queryA       108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
                :  *      *      *** **   * * *  * *    ***    ****    *** **  *:
2f9m_A_1     105:DHADS----NIVIMLVGNKSDLRHLRAVPTDEARAFA-EKNNLSFIETSALDSTNVEEAFKNI: 162
SecStr          :HHS T----T EEEEEEE GGGGGG  S HHHHHHHH-HHTT EEEE  TTT TTHHHHHHHH:    
ExpBur          :eebee----ebbbbbbbbebeeeeebebeeeebeebb-eeeebebbbbbbeeeeebeebbeeb:    
Contact         :                 bb bb                          bbb                                                 


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