Protein Model on 1yu9_A_1_E_1
(TEMPLATE: 
1yu9
)Protein Model on 1yu9_A_1_E_1
(TEMPLATE: 1yu9
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [175 aa] | GTP-binding protein :RAB4A_HUMAN | |
| 2 | b | E 1 (A) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D(N) 17S(A) 18G 19V(T) 20G 21K 22T(S) 23S(C) 33F 37Y(S) 38K(N) 39A(H) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 59.1 %/39.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1yu9_A_1 identity=39.0% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * * * ** * * *** *** * * * * *********** * **** ** * * * * * *:
1yu9_A_1 11:LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNW----L: 106
SecStr :EEEEEEEESTTSSHHHHHHHHHHSS TT SSEEEEEEEEEETTEEEEEEEEEE SGGGHHHHGGGGTT EEEEEEETT HHHHHTHHHH----H:
ExpBur :ebebbbbbbeebbbbbbbebbeeeeeeeeeeebebeeebeeebebeeeebbbebebbbbeeebeeebbebbeebebbbbbbbbbeeebbebbeeb----b:
Contact : bbbbbbbb b bbbb bb
queryA 108:IQASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
: * * *** ** * * * * **** ** ** ** * :
1yu9_A_1 107:TDARMLASQNIVIILCGNKKDLDADREVTFLEASRFA-QENELMFLETSALTGEDVEEAFVQCARKILNK: 175
SecStr :HHHHHHS TT EEEEEEE TT GGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHHHHHH :
ExpBur :eebeeebeeebbbbbbbbeeeeeeeeebeeeebeebb-eeeebeebbbbbeeeeebeebbeebbeeebee:
Contact : bb bb bbb
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[assembly_id:1]
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