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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [172 aa] | Ras-related protein Rab-8A :RAB8A_HUMAN | |
2 | b | C 1 (A) | non-polymer(GTP) | GUANOSINE-5'-TRIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T 23S(C) 33F 34S(N) 35N(S) 37Y(F) 39A(S) 40T 65A 66G 125N 126K 128D 129L(V) 155S 156A 157K (identity: 73.9 %/41.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6whe_A_1 identity=41.2% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * ******** * *** ** * ******* *** * **** ** * * * * : 6whe_A_1 11:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGLERFREITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 110 SecStr :EEEEEEE TTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHHTSTT SEEEEEEETT HHHHHTHHHHHHHHH: ExpBur :ebbbbbbbbeebbbeebbebbeeeeeeeeeeebebeeeeeeebebeeeebebebbbbbbeeebeeebeeebeebebbbbbbbbeeeebbeebeebbebbe: Contact : bbbbbbbb bbb b bb bb queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172 : ** * * **** * *** * * ***** **** ** * ** : 6whe_A_1 111:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 171 SecStr :HHS T-T EE---EEEEE TT GGG S HHHHHHHHHHH-T EEEE BTTTTBSHHHHHHHHHHH: ExpBur :eebee-ebeb---bbbbbebeeeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbebbbeb: Contact : bb bb bbb |