Protein Model on 4hb2_A_1_C_1 (TEMPLATE: 4hb2 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [204 aa] GTP-binding nuclear protein Ran :RAN_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [1017 aa] Exportin-1 :XPO1_YEAST:XPO1_YEAST 43A(V) 45F(V) 62W 67Q 69R(K) 72S(G) 73L 74G(R) 75V(D) 76A(G) 77F(Y) 79R(I) 80G(Q) 97K 101S(N) 104D(R) 113R 114D(V) 116E 137K 144Y(H) 145S(R) 146K 148N 150P(Q) 151Y 153E(D) 160I(Y) 172N(K) (identity: 34.5 %/34.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4hb2_A_1 identity=34.2%
queryA         7:VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
                :*  *    ** * ***          *   * ** *                   ******* *  *    *  * *    ****   * *    *    :
4hb2_A_1       9:VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL: 108
SecStr          : EEEEEEEE TTSSHHHHHHHHHHS    S     SEEEEEEEEEETTEEEEEEEEEE  SGGG TTGGGGGTT SEEEEEEETT HHHHHTHHHHHHHH:    
ExpBur          :eebbbbbbbbeebbbbbbbebbeeeeeeeeeeebebeeeeebebebeeeebebbbebbbbeeeebeeeeebbeebebbbbbbbbeeeebbebbeebbeeb:    
Contact         :                                    b b                b    b b  bbbbbb bb                b   b  b  

queryA       107:LIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
                :      *  ** * *  *** *   * *  *        * *  *   ***   * *  *   **   :
4hb2_A_1     109:V-----RVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI: 169
SecStr          :H-----HH SS  EEEEEE TTSSS SS GGG  --HHHHHT EEEE  TTT TTTTHHHHHHHHHHH:    
ExpBur          :e-----eebeebebbbbbbeeeeeebebeeeebe--bbeeeebebbebbbeeeebeeebbbbbbeeee:    
Contact         :      bb b                    b      bbb b bb b      b           b                                  


Input Residue Numbers for Focused Sites

ex) 2,15,123