Protein Model on 1yvd_A_1_C_1
(TEMPLATE: 
1yvd
)Protein Model on 1yvd_A_1_C_1
(TEMPLATE: 1yvd
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [166 aa] | Ras-related protein Rab-22A :RB22A_MOUSE | |
| 2 | b | C 1 (A) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D 17S(T) 18G 19V 20G 21K 22T(S) 23S 33F 34S(D) 35N(P) 37Y(I) 39A(P) 40T 66G 125N 126K 128D 129L 155S 156A 157K (identity: 72.7 %/42.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1yvd_A_1 identity=42.4% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
:*** *** **** * * * **** * ** * * ********** * *** * * * ** ** * * :
1yvd_A_1 6:LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVREL--: 103
SecStr :EEEEEE TTSSHHHHHHHHHH TT SSEEEEEEEEEETTEEEEEEEEEE SGGGGGGHHHHHTT SEEEEEEETT HHHHHTHHHHHHHH--:
ExpBur :bbbbbbbeeebbbbbbbebbeeeeeeeeeeebeeeeebeeeeeeeeeebebbbebbbbeeebeeebeebbeebebbbbbbbbbbeebeeebeebbeeb--:
Contact : bbbbbbbb bbb b bb b
queryA 109:QASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
: * *** ** * * * * * ***** *** * * *:
1yvd_A_1 104:--RQHGPPSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAI-FVETSAKNAININELFIEISR: 164
SecStr :--HHHS TT EEEEEEE TT GGG S HHHHHHHHHHTT E-EEE BTTTTBSHHHHHHHHHH:
ExpBur :--eeeeeeebbebbbbbebeeeeeeebeeeebeeebeeeebb-bbbbbbeeeeebeebbebbbe:
Contact : bb bb bbb
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[assembly_id:1]
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