[pdbjlvh2]Protein Model on 1vg1_A_1_C

Protein Model on 1vg1_A_1_C_1 (TEMPLATE: 1vg1 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RAB7A_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [166 aa]	Ras-related protein Rab-7 :RAB7_RAT
2	b		C 1 (A)	non-polymer(GDP)	GUANOSINE-5'-DIPHOSPHATE	16D 17S 18G 19V 20G 21K 22T 23S 33F 125N 126K 128D 129L 155S 156A 157K (identity: 100.0 %/91.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1vg1_A_1 identity=91.7%

queryA         5:KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD: 104
                :******************************        **********************       *********************************:
1vg1_A_1       5:KKVLLKVIILGDSGVGKTSLMNQYVNKKFSXXXXXXXXADFLTKEVMVDDRLVTMQIWDTXXXXXXXSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD: 104
SecStr          :   EEEEEEE  TTSSHHHHHHHHHHS   -------- EEEEEEEEETTEEEEEEEEE -------   HHHHHT SEEEEEEETT HHHHHTHHHHHH:    
ExpBur          :eeeebbbbbbbbeebbbeebbebbbeeeee--------eeeeebebebeeeebbbbbbbe-------eeeeebbeebbbbbbbbbbebeebbeebeeebe:    
Contact         :           bbbbbbbb         b                                                                       

queryA       105:EFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNE: 185
                :*********************************************************************************:
1vg1_A_1     105:EFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNE: 185
SecStr          :HHHHHH  SSTTTS EEEEEE TTSSS SS HHHHHHHHHTTT   EEEEBTTTTBSHHHHHHHHHHHHHHHHHHHHHTT :    
ExpBur          :ebbeebebeeeeebbbbbbbbeeeeeeeebeeeebeebbeebeebebbbbbbeeeeebeebbeebbebbbebbeeeeeeee:    
Contact         :                    bb bb                         bbb

Protein Model on 1vg1_A_1_C_1 (TEMPLATE: 1vg1 )

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