Protein Model on 5ub8_A_2_B_2
(TEMPLATE: 
5ub8
)Protein Model on 5ub8_A_2_B_2
(TEMPLATE: 5ub8
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 2 (A) | polymer(polypeptide(L)) [174 aa] | Likely rab family GTP-binding protein :Q59KX4_CANAL | |
| 2 | b | B 2 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(N) 33F 34S(N) 35N(L) 36Q(E) 68E 125N 126K 128D 129L 155S 156A 157K(L) (identity: 70.0 %/34.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5ub8_A_2 identity=34.4% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * * * * * * ********** * **** * * * * :
5ub8_A_2 15:LYKIVLIGDSGVGKSNLLSRFTRDEFNLEXXXXXGVEFATRTLEIDGKRVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELK: 114
SecStr :EEEEEEEE TTSSHHHHHHHHHS ----- EEEEEEEETTEEEEEEEE SGGGTS HHHHTT SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbeebbbbbeeeeeeee-----eeeebeeebebeeeebebebebbeebbeeeebeeebbeebebbbbbbbbeeeebbebbeebbebbe:
Contact : bbbbbbbb bbbb b
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172
: * * *** ** * * * * ** * ** ** * *:
5ub8_A_2 115:EHADA----NIIIELVGNKSDLDHLRAVPTEEAKNFA-MENNLLFTEASALSSDNVDLSFHQLLKN: 175
SecStr :HHS T----T EEEEEEE TT GGG S HHHHHHHH-HHTT EEEE BTTTTBTHHHHHHHHHHH:
ExpBur :eebee----ebbbbbbbbebeeeeeeebeeeebeeeb-eeeebebbbbbbeeeeebeebbeebbee:
Contact : bb bb bbb
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[assembly_id:1]
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