[pdbjlvh2]Protein Model on 2il1_A_2_B

Protein Model on 2il1_A_2_B_2 (TEMPLATE: 2il1 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RAB7A_HUMAN)	A 2 (A)	polymer(polypeptide(L)) [163 aa]	Rab12 :RAB43_HUMAN
2	b		B 2 (A)	non-polymer(MG)	MAGNESIUM ION	22T (identity: 100.0 %/37.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2il1_A_2 identity=37.2%

queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                :* *** *  ********              * * **  * *         *********** *   * ** *    ** * *   **  *  *      :
2il1_A_2      27:LQVIIIGSRGVGKTSLMERFTDXXXXXXXXSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDK: 126
SecStr          :EEEEEE STTSSHHHHHHHH  --------  TTEEEEEEEEEETTEEEEEEEEEE  SGGGHHHHHHHHHH SEEEEEEETT HHHHHTHHHHHHHHHH:    
ExpBur          :bebbbbbbeebbbeebbeebbe--------eeeebeeeeeebebeebebebbbbbbbbeeeebeebbeebeebebbbbbbbbbeeebbeebeebbebbee:    
Contact         :             b                                                                                      

queryA       109:QASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
                : **    *       *** * *  *                    * ***   **   *       ** :
2il1_A_2     127:YAS----EDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKK: 191
SecStr          :HS ----TT EEEEEEE GGGGGG  S HHHHHHHHHTSTT EEEE BTTTTBSHHHHHHHHHHHHHHT:    
ExpBur          :ebe----eebebbbbbbeeeeeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbeebbbbbbee:

Protein Model on 2il1_A_2_B_2 (TEMPLATE: 2il1 )

Input Residue Numbers for Focused Sites