Protein Model on 7mo0_A_1_B_1 (TEMPLATE: 7mo0 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [211 aa] GTP-binding nuclear protein Ran :RAN_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [126 aa] Nuclear pore complex protein Nup50 :NUP50_HUMAN 27Q(R) 30N(T) 31K(G) 32K(E) 33F 50V(F) 127I(V) 128D 158E(S) 159A(N) 160I(Y) 162V(F) 163E (identity: 23.1 %/34.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7mo0_A_1 identity=34.0%
queryA         6:KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE: 105
                : *  *    ** * ***          *   * ** *                   ******* *  *    *  * *    ****   * *    *   :
7mo0_A_1       9:QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIUFDVTSRVTYKNVPNWHRD: 108
SecStr          :S EEEEEEEE TTS HHHHHHHHHT     S     SEEEEEEEEEETTEEEEEEEEEE  SHHHH   HHHHTT  EEEEEEETT HHHHHTHHHHHHH:    
ExpBur          :eeebbbbbbbbeebbbeebbeebeeeeeeeeeebbeeeeebebebebeeeebbbebebbbbeeeebeebeebbeebebbbbbbbbeeeebbeebeebbee:    
Contact         :                     b  bbbb                b                                                       

queryA       106:FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
                :       *  ** * *  *** *   * *  *        * *  *   ***   * *  *   **   :
7mo0_A_1     109:LV-----RVCENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI: 170
SecStr          :HH-----HHH S  EEEEEE TTSSS SS TTT  --   STTEEEEE BTTTTBTTTHHHHHHHHHHH:    
ExpBur          :be-----eebeebbbbbbbbeeeeeeeebeeeebe--eeeeeebebbbbbbeeeeeeeebbbbbbeeee:    
Contact         :                     bb                             bbb bb                                          


Input Residue Numbers for Focused Sites

ex) 2,15,123