Protein Model on 3sfv_A_1_B_1 (TEMPLATE: 3sfv )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [179 aa] Ras-related protein Rab-1A :RAB1A_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [342 aa] LidA protein, substrate of the Dot/Icm system :A5IFX1_LEGPC 8L 17S 18G 30N(D) 33F(Y) 34S(T) 36Q(S) 37Y 38K(I) 39A(S) 41I 42G 43A(V) 44D 45F 47T(I) 58T(K) 60Q 62W 67Q 69R 70F 72S(T) 73L(I) 76A(S) 77F(Y) 79R 91T 92A(D) 101S(Q) 104D(Q) 107L(D) 108I(R) 109Q(Y) 126K (identity: 45.7 %/40.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3sfv_A_1 identity=40.3%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *    *******  *            *  *** **       *      ***********       ****     * ***    *     *  *  :
3sfv_A_1      16:LFKLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 115
SecStr          :EEEEEEESSTTSSHHHHHHHHHH    SS    SS EEEEEEEEETTEEEEEEEEE   SGGG TTHHHHTTT  EEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbeebbebbbeeeeeeeeeeeeeeeeeeeebebeeebbebebbbbbeeeeebeebeeebeebebbbbbbbbeeeebbeebeebbebbe:    
Contact         :b        bb           b  bb bbbb bbbbb b          b b b    b bb bb  bb b           bb        b  b  b

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :  **    **      *** **    *              **  ***** * **** * * *:
3sfv_A_1     116:RYAS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 174
SecStr          :HHS ----TT EEEEEEE TT GGG  S HHHHHHHHHHHT  EEE  TTT TTHHHHHHHHH:    
ExpBur          :eebe----eebbebbbbbebeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbebbb:    
Contact         :bb                b                                                                                 


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