Protein Model on 3rwm_A_1_B_1
(TEMPLATE: 
3rwm
)Protein Model on 3rwm_A_1_B_1
(TEMPLATE: 3rwm
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [179 aa] | GTP-binding protein YPT32/YPT11 :YPT32_YEAST | |
| 2 | b | B 1 (B) | non-polymer(GNP) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 16D 17S 18G 19V 20G 21K 22T(S) 23S(N) 33F 34S(N) 35N(I) 37Y(S) 39A(S) 40T 65A 66G 125N 126K 128D 129L 155S 156A 157K(L) (identity: 69.6 %/35.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3rwm_A_1 identity=35.0% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * * *** * * * ******* ** * **** * * * *:
3rwm_A_1 10:LFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHW----L: 105
SecStr :EEEEEEE TTSSHHHHHHHHHH TT SEEEEEEEEEETTEEEEEEEEEE SS HHHHHHHHTT EEEEEEETTBHHHHHTHHHH----H:
ExpBur :ebbbbbbbbeebbbebbbebbbeeeeeeeeeebeeeeeeeeebebeeeebebbbebbbbeeeeeeebeebbeebebbbbbbbbeeeebbeebeeb----b:
Contact : bbbbbbbb bbb b bb bb
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * *** ** * * * * * **** ** ** :
3rwm_A_1 106:TELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAM-ENQMLFTETSALNSDNVDKAFREL: 167
SecStr :HHHHHHS SS EEEEEEE GGGGGG S HHHHHHHHH-HTT EEEE TTT TTHHHHHHHH:
ExpBur :ebbeeeeeeebebbbbbbebeeeeeeebeeeebeebbe-eeebebbbbbbeeeeebeebbeeb:
Contact : bb bb bbb
|
[assembly_id:1]
[help]