Protein Model on 2if0_A_1_B_1
(TEMPLATE: 
2if0
)Protein Model on 2if0_A_1_B_1
(TEMPLATE: 2if0
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [174 aa] | Ras-related protein Rab-27B :RB27B_MOUSE | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [175 aa] | Ras-related protein Rab-27B :RB27B_MOUSE | 8L 9L(I) 10K 11V(L) 12I(L) 13I(A) 17S 21K 22T 25M(L) 26N(Y) 28Y 29V(T) 31K(N) 33F 34S(N) 35N(P) 36Q(K) 37Y(F) 38K(I) 39A(T) 40T 41I(V) 42G 43A(I) 44D 45F 46L(R) 47T(E) 48K 49E(R) 50V 52V(Y) 57V 58T(H) 59M(L) 60Q 61I(L) 62W 63D 64T 68E 70F 73L 77F 166F(V) 170A(L) 171R(D) 174L(M) 175K (identity: 46.0 %/39.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2if0_A_1 identity=39.8% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL----------VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFK: 97
:* * ********* * ** * * ** * * * * * ***** *** ** ** * * * ** * * :
2if0_A_1 11:LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDXXXXXXXXXXAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFL: 110
SecStr : EEEE TTSSHHHHHHHHH S EEEEEEEEEEE ---------- EEEEEEEEEEESHHHHHHHHHHHHTT EEEEEEETT HHHHH:
ExpBur :eeeebbbeeeebbeeebeeeeeeeeeeeeeeeeeeeeeeeeeeeee----------eeeeeeeeeeeeeeeeeeeeeeeeeeebebbbbbbbbbeeebbe:
Contact :bbbbbb b bb bb bb b bbbbbbbbbbbbbbbbbb b bbbbbbbbbbb b b b b
queryA 98:TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
: * * * * *** ** * * ******** *** * * :
2if0_A_1 111:NVRNWMSQLQANAYCENPD---IVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKR: 186
SecStr :HHHHHHTT TTTS E---EEEEEE TT GGG S HHHHHHHHHHTT EEE TTT TTHHHHHHHHHHHHHHH:
ExpBur :ebeeebeeeeeeeeeeeeb---bbbbbbebeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbeebeeebeeb:
Contact : b bb bb
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[assembly_id:3]
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