[pdbjlvh2]Protein Model on 1yzl_A_1_B

Protein Model on 1yzl_A_1_B_1 (TEMPLATE: 1yzl )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RAB7A_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [172 aa]	Ras-related protein Rab-9A :RAB9A_MOUSE
2	b		B 1 (A)	non-polymer(MG)	MAGNESIUM ION	22T(S) 40T 63D (identity: 66.7 %/55.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1yzl_A_1 identity=55.3%

queryA         5:KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD: 104
                :*  * * * *** **** **** **  **  *   ***  ** *   **   ************** **   **** *** * * *     *  *  *  :
1yzl_A_1       8:KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKK: 107
SecStr          :  SEEEEEEE  TTSSHHHHHHHHHH    TT     S EEEEEEEESSSSEEEEEEEE   SGGGHHHHGGGTTT SEEEEEEETT HHHHHTHHHHHH:    
ExpBur          :eeeebbbbbbbbeebbbbbbbebbeeeeeeeeeeebeebeeeeeeeebeeeebebbbbbbbbeeebeeebbeebeebbbbbbbbbbeeeebbeebeebee:    
Contact         :                 b                 b                      b                                         

queryA       105:EFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
                :**   *    ** **** **** *   *** *  *****      ********   **  **    *  *:
1yzl_A_1     108:EFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRIL: 177
SecStr          :HHHHHH  S GGG  EEEEEE TT SS SS HHHHHHHHHHTT   EEE  TTT TTHHHHHHHHHHHHH:    
ExpBur          :bbeeebebeeeeebbbbbbbbeeeeeeeebeeeebeebbeeeeebbbbbbbbeeeeebeebbebbbeebe:

Protein Model on 1yzl_A_1_B_1 (TEMPLATE: 1yzl )

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