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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | J 1 (J) | polymer(polypeptide(L)) [493 aa] | Leucine-rich repeat-containing protein 32 :LRC32_HUMAN | |
2 | b | U 1 (U) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 359H(N) 361N(D) 363E(S) 364D(Y) 383Y(F) 385S(N) 411I(L) (identity: 0.0 %/31.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6gff_J_1 identity=31.8% |
queryA 28:CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTE: 127 :* * * * *** ** * * **** * * * ** * ** * * * * * * * ** * : 6gff_J_1 7:CKMVDKKVSCQVLGLLQVPSVLPPDTETLDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRLA---------------: 91 SecStr : EEETTEEE TTS SS S S TT EEE TTS EE HHHHTT TT SEEE SS EE TTTGGG TT EEE SS GG---------------: ExpBur :beeeeeebebeeeebeebbeebeeebeebebbebebeebeeeebeebeebbebbbbebebeebeeebbeebeebeebbbbebebb---------------: queryA 128:LHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQV-QLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGL: 226 : * * **** * * * * * * * * * * * * ** * * ** *: 6gff_J_1 92:---MATALSAGGLGPLPR---VTSLDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTFRDMP--ALEQLDLHSNVLMDIEDGAFEGLPRLTHL: 183 SecStr :---GHHHHSTT S SS--- EEE TTS BTTHHHHH TT EEE SSB EE TTSS S T--T EEE SS EE TTTTTT TT EE: ExpBur :---ebbeebeebbbebee---bebbebbebebeeeebeebbeebeebeebbbbebebbebeeebbeebe--ebeebebebbebeeeeebbbeebeebeeb: queryA 227:FLNNVQLGP----SLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLF: 322 : * * ** * * ** * * ** *** * * * ** * * * ** * : 6gff_J_1 184:NLSRNSLTCISDFSLQQLRVLDLSCNSIEAF-----QTASQPQAEF------QLTWLDLRENKL--LHFPDLAALPRLIYLNLS-NNLIRLPXXXXXXXX: 269 SecStr :E S EE SS EEE SS EE----- SS SS ------ EEE SS -- S GGG TT EEE -SS --------: ExpBur :ebbebebebbeebebeebbebbbbebebbbb-----ebeeeeeeeb------ebeebbbeebeb--eeebebebbeebeebbbb-ebebebe--------: queryA 323:NVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKI: 422 : * * * * * * * * * ** *** ** * * * * : 6gff_J_1 270:XI------HAPSEGWSALXXXXXXXXXXXXXXXQLLNLDLSYNEIELIPDSFLEHLTSLCFLNLSRN--CLRTFEARRLGSLPC--LMLLDLSHNA----: 355 SecStr :- ------EETTTTEE --------------- EEE SS HHHHHH TT EEE SS-- EEEE STT S S-- EEE SS ----: ExpBur :-e------ebeeeeeeee---------------ebeebbbbebebeebeeebbeebeebeebebbeb--ebeebebeeeebbee--bbebbbbebe----: Contact : b b bb b b b queryA 423:ESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLR--RVA-----LKNVDSSPSPFQPLRNLTILDLSN: 515 : ** * ** * * * * * ** ***** * ** * * * * : 6gff_J_1 356:----------LETLELG------------ARALGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVSPCXXXXXXXXXXCVAFSGITSLRSLSLVD: 433 SecStr :---------- EEEE ------------TTTSTT EEE TT TTTGGG TT EEE TTS B ---------- B SS SS EEE TT: ExpBur :----------beebebe------------eebbeebbebbbbebebeebeeebbeebeebbebbbeebebebe----------ebbbeebeebbebbbbe: queryA 516:NNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIY--FLKGL-SHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSL: 612 :* * * * * * * *** * ** * * * ** * ** * * * *** ***: 6gff_J_1 434:NEI-----------ELLRAGAFLHTPLTELDLSSNPGLEVATGALGGLEASLEVLALQGNGLMVLQVDL-PCFICLKRLNLAENRLSHLPA--WTQAVSL: 519 SecStr :S ----------- EE TTTTTT SEEE S TT EE TTSS S TTT EEE TTS S S G-GG TT EEE SS -- S : ExpBur :beb-----------eebbeebbeebebebbebbebeebeeeeebbeebeeebbebbbeebebeeeeeee-eebeebbbbebbebebeeeee--eeeeeee: queryA 613:KSLNLQKN: 620 : * * *: 6gff_J_1 520:EVLDLRNN: 527 SecStr : EEE : ExpBur :eeeeeeee: |