Protein Model on 3rg1_G_1_C_1 (TEMPLATE: 3rg1 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR3_HUMAN) G 1 (J) polymer(polypeptide(L)) [599 aa] CD180 molecule :A6QNK7_BOVIN
2 b C 1 (I) polymer(polypeptide(L)) [397 aa] CD180 molecule :A6QNK7_BOVIN 86T(Q) 160S 182K(A) 184Q(H) (identity: 25.0 %/30.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3rg1_G_1 identity=30.0%
queryA        27:KCTV--SHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTN: 124
                :***         *  * *   ** **    **    * *       * *   *  **     *        *    *    *  * *             :
3rg1_G_1       6:KCTEKEGNRTYNCENLGLREIPDTLPNTTEVLEFSFNFLPTIQNTTFSRLINLIFLDLTRCQINWVHEDTFQSHHQLNTIVLTGNPLIFMAETSLTGPKF: 105
SecStr          :  EEEETTTEEE TTS  SS  TTS TT  EEE  S   SEE TTTTSS TT SEEE TTS   EE TTTTTT TT  EEE TT    EE TTTT   S :    
ExpBur          :eeeeeeeebebebeeeeeeebeeebeeebeebebbebebeebeeebbeebeebeebbbbebebeebeeebbeebeebebbbbebbebeebbeebbbebee:    
Contact         :                                                             b                                      

queryA       125:LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLF: 224
                :*  * *    *      *     **  * *  *  **  *       **  *   ** *                  *    * **   ** *  *   *:
3rg1_G_1     106:LKHLFLTQTGISNLEFIPVHNLENLESLHLGSNHISSINLPENFPTQNLKVLDFQNNAIHYISRKDTNSLEQATNLSLNFNGNDIKGIEPGAF--ISKIF: 203
SecStr          :  EEE TTS    GGGS  TT TT SEEE TTS        TT   TT  EEE  SS   EE HHHHHTTTT SSEEEE TT    EE TTTT-- STTE:    
ExpBur          :bbebebeebebeebeebbeebbeebebbbbbebebeebebbeebebeebbebbbeebebeebebebbeebeebeebebbbbebebeebeeebb--ebebb:    
Contact         :                                   b                     b b                                        

queryA       225:GLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGL--F: 322
                :         * **              **              * **    *  *                **   *         * * *    **   :
3rg1_G_1     204:----QSLKFGGSL--------------NLFI-----------IFKGLQNSTLQSL----------------WLGTFED-----TDDQYLTSATFEGLCDM: 253
SecStr          :----EEEE TT S-------------- HHH-----------HHHHT S EEEEE----------------E    TT-----S    B GGGGGGGGGS:    
ExpBur          :----ebbebbbbe--------------ebee-----------bbebbbebebeeb----------------ebbbeee-----eeebebeeebbeebeeb:    

queryA       323:NVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC---LEHLNMEDNDIPGIKSNMFTGLINLKYLSL-SNSFTSLRTLTNETFVSLAHSPLHILNLTKNK: 418
                : *   **                  * *     *      *        *  *    *   ** * *  ***  *       * **    * *    *  :
3rg1_G_1     254:SVESINLQKH------------RFSDLSSSTFRCFTRVQELDLTAAHLNGLPSGI-EGMNSLKKLVLNANSFDQLCQINAASFPSL--RDLYI----KGN: 334
SecStr          :EEEEEE TT ------------ BSS  GGGGTT TT  EEE TT   S   S  -STTTT  EEE TT   SBGGGG GGG TT -- EEE ---- S :    
ExpBur          :ebeebbbeeb------------bbeeeeeebbebbeebeebebbbbebeebbeeb-ebbeebbbbbbbebbbeebeebebebbeeb--bebeb----eeb:    

queryA       419:ISKIE--SDAFSWLGHLEVLDLGLNEI-GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN: 515
                :  *          *  *  ***    *            *       ****  * *    *   * *  *      *  *    **** *  *  * ** :
3rg1_G_1     335:MRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHL-HVKAPHSPFQNLHLLRVLNLSH: 433
SecStr          :SS BB  SSSSTT TT  EEE TTS B EEEETTTTTTT TT  EEE  S S EEE TTTTTT TT  EEE TT  E-E  TT  TTTT TT  EEE TT:    
ExpBur          :eeebebeebbbeebeebeebbbbebebebeebbeebbbebbbbeebbbbebeebebeeebbeebeebeebebbebeb-eeeeeebbbbebeebebbebbe:    

queryA       516:NNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIY---FLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSL: 612
                :      *   * **  *  * ** *            * *     *     * ** * *     *    *  *      **  * *             *:
3rg1_G_1     434:CLLDTSNQHLLAGLQDLRHLNLQGNSFQ--------DGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKGL: 525
SecStr          :    TT TTTTTT TT  EEE TT   S--------TTEE SS GGGG TT SEEE TTS   EE GGGGTT TT  EEE  SS   GGGGGGGTT  S :    
ExpBur          :bebebebeebbbebeebeebbbeebebe--------ebebeeebbbeebeebebbbbbebebeebeeebbeebeebeebbbbebebebebbebbeebeeb:    

queryA       613:KSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFD: 692
                :  **   * *         **           ** ****  *  *  *  *      * *    *  **   *  * * *:
3rg1_G_1     526:Y-LNMASNNIRIIPPHLL-PALSQQSIINLSHNPLDCTCSNI-HFITWYKENLHKL-EDSEETTCANPPSLRG--VKLSD: 599
SecStr          :E-EE  SS      GGGH-HHHHTSSEEE  SS EE SGGGH-HHHHHHHHTGGGB-TTGGG BEEESGGGTT-- BGGG:    
ExpBur          :e-bbbbebebeebbeebb-ebbeebeebbbbebebbbeeebb-ebbebbeebeeeb-eebeebebeeeeeeee--eebee:

Input Residue Numbers for Focused Sites

ex) 2,15,123