[pdbjlvh2]Protein Model on 4r6j_D

Protein Model on 4r6j_D_1 (TEMPLATE: 4r6j )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(TLR3_HUMAN)	D 1 (D)	polymer(polypeptide(L)) [252 aa]	Lucine rich repeats DLRR_H

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4r6j_D_1 identity=50.6%

queryA       462:YLSYNKYLQLTRNSFALVPSLQRLM-LRRVALKNVDSSPSP---FQPLRNLTILDLSNNNIANI------------------------NDDMLEGLEKLE: 533
                :**    ** *  *       *  *  *    * *      *   *  * *** * ****                             **   ***  * :
4r6j_D_1      60:YLPNVRYLALGGNKLHDISALKELTNLGWLNLSNNQLETLPQGVFEKLTNLTTLNLSNNQLTSLPQGVFERLASLTTLNLSNNNLANLNDKVFEGLTNLT: 159
SecStr          :G TT  EEE TTS  S  GGGTT TT  EEE  SS      TTTTSS TT  EEE  SS   B  TTTTSS  S  EEE  SS   B  TTSSTT TT  :    
ExpBur          :ebeebeebbbbebebeebebbbebeebbebebbebebeebeebbbeebeebeebebbebebeebbeebbeebeebeebebbebebeebeeebbeebeebe:    

queryA       534:ILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSV: 625
                : * *  **********************  *  ***  ***** * ******  *    *  * *  **  **     ** ***  *   * :
4r6j_D_1     160:TLNLSNNNLARLWKHANPGGPIYFLKGLTNLTTLNLSNNGFDEFPKEVFKDLTSLTTLNLSNNQLTSLPQGVFERLTNLKTLNLSNNQLQSL: 251
SecStr          :EEE  SS  SGGG TTSTTS   TTTT TT  EEE  SS      SGGGTT TT  EEE TTS      SSHHHH TT  EEE  SSHHHH :    
ExpBur          :ebebbebebbebbeeeeeeeebbbbeebeebeebebbebebeebeeebbeebeebeebebbebebeeeeeebeeebeebeeeebeebeeeee:

Protein Model on 4r6j_D_1 (TEMPLATE: 4r6j )

Input Residue Numbers for Focused Sites