Protein Model on 5gs0_D_1_TA_1 (TEMPLATE: 5gs0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR3_HUMAN) D 1 (B) polymer(polypeptide(L)) [663 aa] Toll-like receptor 3 :TLR3_HUMAN
2 b TA 1 (B) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 416K (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5gs0_D_1 identity=100.0%
queryA        29:TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL: 128
                :****************************************************************************************************:
5gs0_D_1       3:TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL: 102
SecStr          : EESSEEE TTS  SS  S S TT  EEE  SS      GGGGSS  S SEEE  SS      HHHHHH TT  EEE  SSS     TTTSTT  S  EE:    
ExpBur          :eeeeeebebeeeeeeebbeebeeebeebebbebebeebebeebeebeebeebebbebebeebebebbeebeebebbbbeebebeebeeebbbebeebeeb:    

queryA       129:HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL: 228
                :****************************************************************************************************:
5gs0_D_1     103:HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL: 202
SecStr          :E  SS      S SSTT TT  EEE  SS  SS    SS   TT  EEE  SS    B HHHHGGGTT EESEEE TT     B TTTTTTSSEE EEE :    
ExpBur          :bbbebebeebeebbbeebeebebbbbbebbbebbebbeeebbeebeebbbbebebebbeeebbebbeebebeebbbbebebeebbeebbebbeebebbbb:    

queryA       229:NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN: 328
                :****************************************************************************************************:
5gs0_D_1     203:NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN: 302
SecStr          : S    HHHHHHHHHHTTTS   EEE TTS   EE TTGGGGGGGS   EEE  SS   EE TTTTTT SS  EEE  S  B EE GGGGTT TT  EEE:    
ExpBur          :bebebbeebbeebbebbbebebeebbbbebebeebeeebbebbeebebbbbbbbebebeebbeebbbebbebeebebbebebeebeeebbebbeebeebb:    

queryA       329:LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS: 428
                :****************************************************************************************************:
5gs0_D_1     303:LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS: 402
SecStr          : TT B    SSSS S EE TTTTTT SS  EEE  S  B    TTTTTT TT  EEE TT BS   EE TTTTGGGTTS   EEE TTS   EE TTTTT:    
ExpBur          :beebbbeeeeeeebbbebeeebbebbeebeebbbeebbbeebeeebbebbeebeebbbbebbeebeebeeebbebbeebebeebbbbebebeebeeebbe:    
Contact         :                                                                                       b            

queryA       429:WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG: 528
                :****************************************************************************************************:
5gs0_D_1     403:WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG: 502
SecStr          :T TT  EEE  SS  EEEE SSTTTT SS  EEE  S SEEEE GGGSTT TT  EEE  SS  B    SS TTTT TT  EEE  SS      TTTTTT:    
ExpBur          :ebeebebbebbebebebebebebbeebeebeebebbebeebebeeebbeebeebeebbbeebebeebebeebbbebbeebbbbbbbebebeebeeebbeb:    

queryA       529:LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK: 628
                :****************************************************************************************************:
5gs0_D_1     503:LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK: 602
SecStr          : TT  EEE  S  TTGGGSTT TTS   TTTT TT  EEE  SS      TTTTTT SS  EEE  SS      TTTTTT  S  EEE  SS      HH:    
ExpBur          :beebeebebbebebbebbeeebeeebbebbeebeebeebbbbbbebeebbeebbbebeebeebbbbebebeebeeebbeebeebebbbbbebebbbbeee:    

queryA       629:VFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLF: 691
                :***************************************************************:
5gs0_D_1     603:VFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLF: 665
SecStr          :HHHHHHTT SEEE  S  B   HHHHHHHHHHHHH  SB TTHHHH BB SSGGGTT BGGG :    
ExpBur          :bbbbbbeebeebbbbebebbbeeebbeebbebbeeeebebeebeeebebeebeeeeeeebeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123