Protein Model on 4arn_C_1_G_1 (TEMPLATE: 4arn )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TLR3_HUMAN) C 1 (C) polymer(polypeptide(L)) [273 aa] TOLL RECEPTOR, VARIABLE LYMPHOCYTE RECEPTOR B.61 CHIMERA :TOLL_DROME:Q4G1L2_EPTBU
2 b G 1 (G) branched(oligosaccharide) alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose 575D(E) (identity: 0.0 %/33.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4arn_C_1 identity=33.3%
queryA       554:PIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES: 653
                :*   *     *  * *  *   * *   * **  *  *  * * *   *   *     ** ***  *   **    *      *       ** ** *  :
4arn_C_1     139:PANLLTDMRNLSHLELRAN-IEEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLASNQLKSVPDGIFD-RLTSLQKIWLHTNPWDCSCPR: 236
SecStr          : TTTTTT TT  EEEEES -     TTTTTT TT  EEE  SS      TTTTTT SS  EEE  SS  S   TTTTT-T TT  EEE  SS B   TTT:    
ExpBur          :beebbeebeebbebebebe-beebeeebbeebeebebbebbebebeebeeebbeebeebeebbbbebebeebeeebbe-ebeebeebebeebebebeeee:    
Contact         :                     b                                                                              

queryA       654:IAWFVNWINE: 663
                :*     * * :
4arn_C_1     237:IDYLSRWLNK: 246
SecStr          :THHHHHHHHH:    
ExpBur          :bebbbebbee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123