[pdbjlvh2]Protein Model on 4bsr_B_1_G

Protein Model on 4bsr_B_1_G_1 (TEMPLATE: 4bsr )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR3_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [480 aa]	LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5 :LGR5_HUMAN
2	b		G 1 (G)	branched(oligosaccharide)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	467K(N) 469L(S) (identity: 0.0 %/36.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4bsr_B_1 identity=36.1%

queryA       437:DLGLNEIGQELTGQEWRGLENIFEIYL--SYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSP-SPFQPLRNLTILDLSNNNIANINDDMLEGLEKLE: 533
                :**** *    *           *  **  * *   **  *     ***  *   * *       *   *  *  *  * * **         *  *  * :
4bsr_B_1      47:DLGLSELPSNLS---------VFTSYLDLSMNNISQLLPNP---LPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQ: 134
SecStr          :SS  SS  SS  ---------TTEEEEE  SS  SSS SS ---    TT  EEE TTS  S   TTTTSS TT  EEE  SS  SB  TTTTTT TT  :    
ExpBur          :eeeeeebbeebe---------eebbbbbbbebebeebbeee---eeebeebebbebbbbebeebeeebbebbeebebbbbbebebeebbeebbeebeebe:    
Contact         :                                b b                                                                 

queryA       534:ILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPA: 633
                : * *  *             *     **  *  * *  *   ****  *  *  *    * **     *   * *  **  * *  * * *  ** *   :
4bsr_B_1     135:SLRLDANHISYV--------PPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFD-G: 225
SecStr          :EEE  SS   B -------- TTSSTT  S  EEE  SS   S  HHHHTT TT  EEE  SS   EE TTTTTT TT  EEE  SS   EE TTTT -S:    
ExpBur          :bbebbebebeeb--------beebbebbeebeebebbebebeebbbebbeebeebeebbbbebebeebeeebbeebeebeebebeebebeebbeebbe-b:    

queryA       634:FRNLTELDMRFNPFD: 648
                :   *  **   *  *:
4bsr_B_1     226:LHSLETLDLNYNNLD: 240
SecStr          : SS  EEE  S   S:    
ExpBur          :beebebbbbbebebe:

Protein Model on 4bsr_B_1_G_1 (TEMPLATE: 4bsr )

Input Residue Numbers for Focused Sites