Protein Model on 4j4l_B_1_D_1
(TEMPLATE: 
4j4l
)Protein Model on 4j4l_B_1_D_1
(TEMPLATE: 4j4l
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR3_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [251 aa] | Internalin B,REPEAT MODULES,Variable lymphocyte receptor B :A4L9V2_LISMN:Q4G1L3_EPTBU | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [166 aa] | Interleukin-6 :IL6_HUMAN | 484R(Y) 486M(A) 510I(Y) 512D(T) 514S(E) 534I(E) 536D(Q) 538Q(W) 566I(Y) 568N 571S(F) 590I(E) 592D 595L(Y) 616N(R) 618Q(Y) 619K(Q) 643R(H) 644F(D) (identity: 10.5 %/34.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4j4l_B_1 identity=34.1% |
queryA 479:VPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIP: 578
: * * * * * * *** * * * * * * * * * * * * * *** * *:
4j4l_B_1 55:LPNVRYLALGGNKLHDI----SALKELTNLTYLTLEPNQLQSLPNGVFDKLTNLKELQLWANQLQSL--------PDGVFDKLTNLTYLNLAFNQLQSLP: 142
SecStr : TT EEEEEETT B ----GGGGG TT EEEEEETT S TTTTTT TT EEEE TT -------- TTTTTT TT SEEE SS SB :
ExpBur :beebeebbbbbeebeeb----ebbeebeebbebbbebeebeebeeebbeebeebeebebbbeebeeb--------eeebbeebeebebbbbbebebeebb:
Contact : b b b b b b b b b b b
queryA 579:VEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNI: 668
: ** * * ** * * ** ** ** * * * ** ** * ** **** * *** * :
4j4l_B_1 143:KGVFDKLTNLTELDLSYNQLQSLPKGVFDKLTQLKDLRLYQNQLKSVPDGVFD-RLTSLQYIWLHDNPWDCTCPGIRYLSEWINK-HSGV: 230
SecStr :TTTTTT TT EEE SS SB TTTTTT TT EEE SS SSTTT-T TT EEE SS B TTTTHHHHHHHHH-HTTT:
ExpBur :eebbeebeebeebbbbebebeebeeebbeebeebebbebbebebeebeebbbe-ebeebeebbbbebebeeeeeebebbbebbee-eeeb:
Contact : b b b b bb bb
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[assembly_id:2]
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