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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [659 aa] | Toll-like receptor 3 :TLR3_HUMAN | |
2 | b | C 1 (E) | polymer(polyribonucleotide) | RNA (46-MER) | 64R 110E 489R 515N 517N 539H 540N 541N 571S 572N 573G 597N (identity: 100.0 %/99.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7wvj_B_1 identity=99.5% |
queryA 29:TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL: 128 :**************************************************************************************** ***********: 7wvj_B_1 6:TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDDTFAFCTNLTEL: 105 SecStr : BSSEEE TTS SS S S TT EEE S S SGGGSS S EEE SS THHHHH TT EEE S GGGSSS S EE: ExpBur :eeeeeebebeeeebeebeeebeeebeebbbbebebeebebeebeebeebebbebbebebeeeeeebbeebeebeebbbeebebeebeeebbbebeebebb: Contact : b b queryA 129:HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL: 228 :********** ***** ***********************************************************************************: 7wvj_B_1 106:HLMSNSIQKIDNNPFVDQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL: 205 SecStr :E TT S SSSS EEE TT SS SS TT EEE TT B TGGGGGGTT EESEEE TT B TTTTTTSSEE EEE : ExpBur :ebeebebeebeeebbbebeebeebbbbebbbebbebbeeebbeebebbbbbebebeebeeebbebbeebebeebbbbebebeebbeebbebbeebbbbeb: queryA 229:NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN: 328 :****************************************************************************************************: 7wvj_B_1 206:NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN: 305 SecStr :TT HHHHHHHHHHHTTTS EEE TTS EE TTTTGGGGGS EEE TTS EE TTTTTT TT EEE S B EE SGGGTT TT EEE: ExpBur :bebebbeeebeebbebbbebebeebbbbebebeebeeebbebbeebebbebbbbebebeebeeebbeebeebeebebbebebeebeeebbebbeebeebb: queryA 329:LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS: 428 :****************************************************************************************************: 7wvj_B_1 306:LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS: 405 SecStr : TT B TTT EE TTTTTT TT EE S B TTSSTT TT EE TT BS EE TTSSGGGSSS EEE TTS EE TTSST: ExpBur :beebbbeeeeeeebebebeeebbeebeebeebbbbebbbeebeeebbeebeebeebbbbebbeebeebbeebbebbeebebeebbbbebebeebeebbbe: queryA 429:WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG: 528 :****************************************************************************************************: 7wvj_B_1 406:WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG: 505 SecStr :T TT EEE S EEE S TTTT TT EEE S SEEE TTSSTT TT EEE TT EESTT SS TTTT TT EEE SS TTSSTT: ExpBur :ebeebebbbbbebebbbebebebbeebeebeebebbebeebebeeebbeebebbeebebeebebeebebeebbbeebeebbbbbbbebebeebeeebbee: Contact : b b b queryA 529:LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK: 628 :****************************************************************************************************: 7wvj_B_1 506:LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK: 605 SecStr : TT EEE S STTTSTTSTT S S TT EEE SS TTSTTS TT EEE TT SS SSS TT EEE S HH: ExpBur :beebeebbbbebebbebbeeebeeebbebbeebeebeebbbbebebeebbeebbebbeebeebbbbebebeeeebebbeebeebebbbbbebebeebeee: Contact : bbb bbb b queryA 629:VFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFP: 687 :***********************************************************: 7wvj_B_1 606:VFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFP: 664 SecStr :HHTTTTSS SEEE S EE STTTTHHHHHHHHS SB TTHHHH EEESGGGTT : ExpBur :bbbebbeebeebbbeebebebeeebbeebeebbeeeebebeeeeeebebeeeeeeeeee: |