Protein Model on 7wvj_B_1_A_1 (TEMPLATE: 7wvj )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR3_HUMAN) B 1 (B) polymer(polypeptide(L)) [659 aa] Toll-like receptor 3 :TLR3_HUMAN
2 b A 1 (A) polymer(polypeptide(L)) [659 aa] Toll-like receptor 3 :TLR3_HUMAN 599N 623T 648D 678N 679T 684H (identity: 100.0 %/99.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7wvj_B_1 identity=99.5%
queryA        29:TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL: 128
                :**************************************************************************************** ***********:
7wvj_B_1       6:TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDDTFAFCTNLTEL: 105
SecStr          :  BSSEEE TTS  SS  S S TT  EEE  S   S   SGGGSS  S  EEE  SS      THHHHH TT  EEE  S       GGGSSS  S  EE:    
ExpBur          :eeeeeebebeeeebeebeeebeeebeebbbbebebeebebeebeebeebebbebbebebeeeeeebbeebeebeebbbeebebeebeeebbbebeebebb:    

queryA       129:HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL: 228
                :********** ***** ***********************************************************************************:
7wvj_B_1     106:HLMSNSIQKIDNNPFVDQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL: 205
SecStr          :E TT       S SSSS     EEE TT   SS    SS   TT  EEE TT     B TGGGGGGTT EESEEE TT     B TTTTTTSSEE EEE :    
ExpBur          :ebeebebeebeeebbbebeebeebbbbebbbebbebbeeebbeebebbbbbebebeebeeebbebbeebebeebbbbebebeebbeebbebbeebbbbeb:    

queryA       229:NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN: 328
                :****************************************************************************************************:
7wvj_B_1     206:NNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLN: 305
SecStr          :TT   HHHHHHHHHHHTTTS   EEE TTS   EE TTTTGGGGGS   EEE TTS   EE TTTTTT TT  EEE  S  B EE SGGGTT TT  EEE:    
ExpBur          :bebebbeeebeebbebbbebebeebbbbebebeebeeebbebbeebebbebbbbebebeebeeebbeebeebeebebbebebeebeeebbebbeebeebb:    

queryA       329:LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS: 428
                :****************************************************************************************************:
7wvj_B_1     306:LKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS: 405
SecStr          : TT B    TTT    EE TTTTTT TT   EE  S  B    TTSSTT TT   EE TT BS   EE TTSSGGGSSS   EEE TTS   EE TTSST:    
ExpBur          :beebbbeeeeeeebebebeeebbeebeebeebbbbebbbeebeeebbeebeebeebbbbebbeebeebbeebbebbeebebeebbbbebebeebeebbbe:    

queryA       429:WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG: 528
                :****************************************************************************************************:
7wvj_B_1     406:WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG: 505
SecStr          :T TT  EEE  S   EEE  S TTTT TT  EEE  S SEEE  TTSSTT TT  EEE TT  EESTT SS TTTT TT  EEE  SS      TTSSTT:    
ExpBur          :ebeebebbbbbebebbbebebebbeebeebeebebbebeebebeeebbeebebbeebebeebebeebebeebbbeebeebbbbbbbebebeebeeebbee:    

queryA       529:LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK: 628
                :****************************************************************************************************:
7wvj_B_1     506:LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK: 605
SecStr          : TT  EEE  S   STTTSTTSTT     S S TT  EEE  SS      TTSTTS TT  EEE TT       SS SSS TT  EEE  S       HH:    
ExpBur          :beebeebbbbebebbebbeeebeeebbebbeebeebeebbbbebebeebbeebbebbeebeebbbbebebeeeebebbeebeebebbbbbebebeebeee:    
Contact         :                                                                      b                       b     

queryA       629:VFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFP: 687
                :***********************************************************:
7wvj_B_1     606:VFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFP: 664
SecStr          :HHTTTTSS SEEE  S  EE STTTTHHHHHHHHS  SB TTHHHH  EEESGGGTT  :    
ExpBur          :bbbebbeebeebbbeebebebeeebbeebeebbeeeebebeeeeeebebeeeeeeeeee:    
Contact         :                   b                             bb    b

Input Residue Numbers for Focused Sites

ex) 2,15,123