Protein Model on 4uip_B_1_A_1 (TEMPLATE: 4uip )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TLR3_HUMAN) B 1 (B) polymer(polypeptide(L)) [238 aa] REPEBODY (RAC1) :E0ACT6_LISMN:Q4G1L3_EPTBU
2 b A 1 (A) polymer(polypeptide(L)) [612 aa] EPIDERMAL GROWTH FACTOR RECEPTOR :EGFR_HUMAN 510I(Y) 538Q(H) 539H(Y) 566I(E) 571S(E) 590I(E) 595L(R) 614S(D) 616N(R) 618Q(Y) 638T(Q) 639E(Y) 641D(W) 643R(H) (identity: 0.0 %/36.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4uip_B_1 identity=36.1%
queryA       502:FQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTL: 601
                : * * *   * *  *    *    *  *  *  * *  * *  *     * *       *  *  * *  *     *  **  *  *   **  * *  *:
4uip_B_1      60:IQYLPNVRYLALGGNKLHDIS--ALKELTNLTYLMLHYNQLQIL-----PNG---VFDKLTNLKELYLSENQLQSLPDGVFDKLTNLTELDLARNQLQSL: 149
SecStr          :GGG TT  EEE TTS     G--GGTT TT  EEE  SS  S  ----- TT---SSSS TT  EEE TTS      TTTTTT TT  EEE  SS     :    
ExpBur          :beebeebeebbbbbbebeebe--bbeebeebbbbbbeebebeeb-----eee---bbeebeebeebbbbebebeebbeebbeebeebbebbbbebebeeb:    
Contact         :        b                           bb                          b    b                  b    b      

queryA       602:PASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNI: 668
                :*  **     ** * *  *   **   **      *       ** ****  *     ***  *   :
4uip_B_1     150:PKGVFDKLTQLKDLRLYQNQLKSVPDGVFD-RLTSLQYIWLHDNPWDCTCPGIRYLSEWINK-HSGV: 214
SecStr          : TTTTTT SS  EEE  SS  S   TTTTT-T TT  EEE  SS B   TTTTHHHHHHHHH-TTTT:    
ExpBur          :bebbbeebeebebbebeebebeebbebbbe-ebeebeebbbbebebebeeeebebbbebbee-eeeb:    
Contact         :            b b b                   bb b b                                                          


Input Residue Numbers for Focused Sites

ex) 2,15,123