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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(3j0a_A auth_asym_id:A) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
843 | N | 761 | 783 | L | S | e | 62.4 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [797 aa] | Toll-like receptor 5 :TLR5_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3j0a_A_1 identity=30.8% |
queryA 199:LKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL-NVVGNDSFAWL: 297 :* * * * * * * ** * * * * *** ** **** * ** *: 3j0a_A_1 75:LRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAV-------LKDGYFRNLKA--------------------LTRLDLSKNQIRSLYLHPSFGKL: 147 SecStr : EEE TT EE TTSS S SS EE TT SS -------STT SS SS-------------------- EEEEES GGGGT : ExpBur :bebbbbbebebeeeeeebbebbeebeebebeebebeebe-------beeebbeebeb--------------------bbebbbbebebebbebbebbeeb: queryA 298:PQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC--------LEHLNMEDN----DIPG------IKSNMFTGLI: 379 : * * * * * * * *** * * ** ** * * ** * ** * : 3j0a_A_1 148:NSLKSIDFSSNQIFLVCEHELEPL---------QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLIL: 238 SecStr :SS EEEEESS SGGGHHH---------HH SS EE SBS SSS TTTT BSEEB SS SSTTTTSGGGGTS S BSEEE : ExpBur :eebeebebbebebeebeeebbeeb---------eeeeeeebbbbbbbebebeebeeeeeebbbeebebeebebbebeeebeebbebbebbbebebebbbe: queryA 380:NLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALV: 479 : * ** ** * * * * * * * ** * * * ** * **** * * : 3j0a_A_1 239:AHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINK-IADEAFYGLDNLQVLNLSYNLLGELYSSNFYGL: 337 SecStr : SS B SSS SSSTTGGGTTTTTTTTS EEE TT EE S SSS EEEEES E-E TTTTTT SS EEEEES S S S SS : ExpBur :beebebbbebebeeeeebeebbebbeebebeebbbbebebeebeeebbeebeebebbbbbebebee-ebeebbeebeebeebebbebbeeeeeebbbeeb: queryA 480:PSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGP-------------------------: 554 :* ** * ** * * **** *** * * * * * : 3j0a_A_1 338:PKV--------------------------AYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI--HFIPSIPDIFLSGNKLVTLPKINLTANLIHLS: 409 SecStr :TT -------------------------- EEE S SS S S EEEEET S --SS S SEEEEES TT EEE : ExpBur :eeb--------------------------bebbbeebebeebeeebbbebeebebbbbeebbebbb--eebeebeebebbebeeeeebeeeeebeebbbb: queryA 555:---------IYFLKGLSHLHILNLESNGF-----DEIPVE-------------------------VFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSL: 615 : *** ** ** * * * * * * ** * * * * ** ** ** * *: 3j0a_A_1 410:ENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGL: 509 SecStr :S SSTTHHHHTT TT EEEEES SSSSS S TT B EEES SSS S SS SS B EE HHHHTT TTSSSS S SEE: ExpBur :ebebeeebbbebbeebeebeebbbeebebeebbeeebbbebeebeebebbebebeebbeeebbebbeebbbbbebbebeeeebeeeeeebeeebeebebb: queryA 616:NLQKNLITSV---------------EKKVFGP---AFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSCK: 697 : * * * * * * ** * * * ** * ** * * * * * * * * : 3j0a_A_1 510:SLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECE-LSTFINWLNHTNVTIAGPPADIYCVYPDSFSGVSLFSLSTEGCX: 608 SecStr :EEES SS S EEEEEEE S SS EEEEEEE SSS- SHHHHHHHTTTTT GGG SS SSS S TTT -: ExpBur :bbbebebeebebeeebeebeebebbebebbbeeeeebeebeebbbbebebbbeee-eeebbebbeebeeeebbeeeebebeebeeeeeeebeeeeeeee-: queryA 698:DSAP-----FELFFMINTSILLIFIFIVLLIHFEGWRISFYWNVSVHRVLGFKEIDRQTEQFEYAAYIIHAYKDKDWV----WEHFSSMEKEDQSLKFCL: 788 : * ** * * * * ** ** ** * * : 3j0a_A_1 609:XXXXXXXXXFSLFIVCTVTLTLFLMTILTVTKFRXXXXXXXXXXXXXXXXDHPQ-GTEPDMYKYDAYLCFSSKDFTWVQNALLKHLDTQYSDQNRFNLCF: 707 SecStr :--------- HHHHHHHHHHHHHHHTTTSHHHH ---------------- G-GGSSS SEEEE STTHHHHHHTHHHHHHSTTTTTT S EE : ExpBur :---------eeeeeeeeeeeeeeeeeeeeeeeee----------------eeee-eebeeebebbbbbbbbeeeeebbeebbbeebeeeeeeeeebebbb: queryA 789:EERDFEAGVFELEAIVNSIKRSRKIIFVITHHLLKDPLCKRFKVHHAVQQAIEQNLDSIILVFLEEIPDYKLNHALCLRRGMFKSHCILNWPVQKERIGA: 888 :***** * * * **** * * * * * * * * * ** * ** * : 3j0a_A_1 708:EERDFVPGENRIANIQDAIWNSRKIVCLVSRHFLRDGWCLE-AFSYAQGRCLSDLNSALIMVVVGSLSQYQLMKHQSI-RGFVQKQQYLRWPEDFQDVGW: 805 SecStr :SSSS SSS HHHHHHHHHHHSSEEEEEE TTHHHHTSTTH-HHHHHHS SS TTEEEEESS SSS S SST-THHHHTT SSSTTTTH: ExpBur :eeeeeeeeeeeebbbeebbebbbbbbbbbbeebbeebbeeb-beebeeeeebeeeeebbbbbbbeeeeeebeeeeebb-eebeebeeebeebeeeeeeee: queryA 889:FRHKL: 893 :* ***: 3j0a_A_1 806:FLHKL: 810 SecStr :HHHHH: ExpBur :beeeb: |