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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [306 aa] | Variable lymphocyte receptor B, Toll-like receptor 4 :Q4G1L2_EPTBU:TLR4_HUMAN | |
2 | b | U 1 (A) | non-polymer(SO4) | SULFATE ION | 624S(T) 652E 653S(H) 654I(Q) 655A(S) 657F (identity: 33.3 %/28.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2z66_A_1 identity=28.9% |
queryA 412:LNLTKNKISKIESDAFSWLGHLEVLDLGLNEIG-QELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI: 510 :* * ** * * * * * * * * ** * * * * * ** * * * **** : 2z66_A_1 33:LELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQM-SEFSVFLSLRNLIY: 130 SecStr :EE SS TTTTTT TT SEEE SS EEEEEEHHHHS S EEE S SEEEEEEE-EET TT EEE TTSEEESS-TTTTTTTT TT E: ExpBur :bbbeebebeebeeeebeebeebebbbbbebebebeebbbeeebbbeebeebbbbebeebebeee-bebbeebebbbbeebebeeb-beebbbeebeebeb: queryA 511:LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNN---LNTLPASVFN: 607 :** * ** ** * * * * * * * * * * * ** * * * *: 2z66_A_1 131:LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFL------PDIFTE-LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN: 223 SecStr :EE TTS EE STTTTTT TT EEE TT EEGGGEE------ S TT- TT EEE TTS EE TTTTTT TT EEE TTS SB SGGGTT T: ExpBur :bbbbebebebeeebbbebbeebebbebbebbbeeeeb------bebbee-beebeebbbbebebeebbeebbebbeebeebbbbebebebbbbebbeebe: queryA 608:NQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPV: 688 : ** * * * * * * * * **** * ** * * ** * **: 2z66_A_1 224:---SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQS-FLQWIKDQRQLLVEV-ERMECATPSDKQGMPV: 299 SecStr :---T EEE TTS B SSSS TT EEE TT EE SGGGHH-HHHHHHHTGGGBS G-GG BEEESGGGTT BG: ExpBur :---ebeebbbbebebeebeeeebeebbeebeebbbbebebbbeeeeee-bbebbeebeebbeee-eebebeeeeeeeeeeb: Contact : b bbbb b |