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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [777 aa] | Toll-like receptor 7 :B3Y653_MACMU | |
2 | b | T 1 (B) | non-polymer(9K9) | 2-amino-9-[(2S,3aR,4R,6R,6aR)-2-hydroxy-6-(hydroxymethyl)-2-oxotetrahydro-2H-2lambda~5~-furo[3,4-d][1,3,2]dioxaphosphol-4-yl]-3,9-dihydro-6H-purin-6-one | 395T 420S(D) 422I(L) 457N(G) 458I 459F(T) (identity: 33.3 %/31.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5zsl_A_1 identity=31.4% |
queryA 28:CTVSHEVADCSHLKLTQ-------------VPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQL: 114 :* ** * ** ** ** * * * * * ** ** * * * * * * : 5zsl_A_1 167:CYVSYSIEKDAFLNLTKLKVLSLKDNNVTTVPTVLPSTLTELYLYNNMIAEIQEDDFNNLNQLQILDLSGNC-----PR-CYNAP-FPCTPCKNNSPLQI: 259 SecStr : SS EE TTTTTT TT EEE SS S S TT SEEE SS B TTTTTT TT EEE SSS----- - TT S-S GGG B : ExpBur :beeebeeeeebbeebeebebbbbbbbebeebbeebbeebbebbbbbbebeebeeebbeebeebebbbbbbbb-----bb-eeeee-beeeeeeeeeebeb: queryA 115:SDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP: 214 : * * * * * *** * * ** **** * * * * * * ** * * * * ** : 5zsl_A_1 260:PVNAFDALTELKVLRLHSNSLQHVPPRWFKNINNLQELDLSQNFLAK-EIGDAKFLHFLPNLI------------QLDLSFNFELQVYRASMNLSQAFSS: 346 SecStr : TTTTTT TT EEE SS S GGGGTT EEE SSS HH-HHTT GGGGG TT ------------EEE S TT BSS GGGGG: ExpBur :eeebbeebeebebbbbbbbbbeebeeebbeebeebeebbbbbbebbe-bbeebebbeebeebe------------ebbbbbbbeeeeeeeebebbebbee: queryA 215:GCFHAIGRLFGLF---LNNVQLGP--SLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNN: 309 : * * * * ** * * * * * ** * *** * : 5zsl_A_1 347:LKSLKILRIRGYVFKELKSFQLSPLHNLQNLEVLDLGTNFIKIANLS------------MFKQFKRLKVIDLSVNKISPXXXXXXXXXXXXXXXXXXXXX: 434 SecStr : TT EEE S BSEE GGGGGGGTT TT EEE SS EE GG------------GGGGGTT SEEE S ---------------------: ExpBur :bebbebbbbbbbbbeebeeebbebbeebeebebbbbbbbebeebebb------------bbeebeebebbbbbebebee---------------------: queryA 310:IQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPL: 409 : * * * ** ** * * * * *** * * ** * ** * ** * ** *: 5zsl_A_1 435:PQ-----VLEQLYYFRYDKYARSCRFKXXXXXXX----XXXXSCYKYGQTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLIS-QTLNGSEFQPLAE--L: 522 SecStr : ----- SSSSS S TT SS --------------- GGGS EEE SS GGGGTT TT SEEE TTS -S S SSTT TT-- : ExpBur :ee-----eeeeeebeebbeeeeeeeee---------------ebbebeebbbbbebebeebeeeebeebebbbbbbbbebebe-bebebebbeebee--b: Contact : b queryA 410:HILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT: 509 : * * * ** * ***** * * * * * * ** ** * ** * : 5zsl_A_1 523:RYLDFSNNRLDLLHSTAFEELRKLEVLDISSNS--------HYFQSEGITHM-LNFTKNLKV----------LQKLMMNDNDISSSTSRTMESESLRTLE: 603 SecStr : EEE SS TTTTTT TT EEE S --------GGGGSTT -GGGGGG TT---------- EEE TT SSS EESS EEE: ExpBur :ebbbbbebebbbeeeebbebbeebebbbbbebe--------eebeeeeeebb-bebbeebee----------beebbbbebebeebebeebebebbebbb: Contact : b b bbb queryA 510:I----LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASV: 605 : ** * * *** ** * * * * * * * * ** * * * ** * * * * : 5zsl_A_1 604:FRGNHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGMP-------PNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERL: 696 SecStr : SS HHHHT TT TTTTTTTEETT EEE SS SS TTTTTTS -------TT EEE SS GGGGGG TT EEE SS S G: ExpBur :bebbebeebbeeeeeebbebbeebeebeebbbbebebeebbeebbebbb-------eebeebbbbebebeebebeebeebeebebbebbebebeebbeeb: queryA 606:FNNQVSLKSLNLQKNLITSVEKKVFGPAFR-------------------------NLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTP: 680 : * *** * * * * * * ** ** * * * *** *** * * ** * * *: 5zsl_A_1 697:SNCSRSLKNLILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTSFPENVLNNLKMLLLHHNRFLCTCDAV-WFVWWVQHTEVTIPYLATDVTCVGP: 795 SecStr :GGT SS EEE SS TTTTTT TT EEE SS GGGS HHHHTT SEEE S EE SGGGH-HHHHHHHH S TTTTTS BEEES: ExpBur :bebbeebeebbbeebebeebbeebbeebeebeebbbbebbbeebeeebbeeebbeebeebbbbebebebeeebe-bbbebbbbbebebeeeeeebebebe: queryA 681:PHYHGFPVRLFDTSSCK: 697 : * * * * : 5zsl_A_1 796:GAHKGQSVISLDLYTCE: 812 SecStr :GGGTT BSTT GGGG: ExpBur :eeeeeeebbebebeeee: |