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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [749 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
2 | b | S 1 (B) | non-polymer(JRI) | (2R,6R)-4-(8-cyanoquinolin-5-yl)-N-[(3S,4R)-4-fluoranylpyrrolidin-3-yl]-6-methyl-morpholine-2-carboxamide | 420S(F) 421K(F) 444G(A) 445Q (identity: 25.0 %/31.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ytx_A_1 identity=31.1% |
queryA 34:VADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS--------------KLEPELCQKLPMLKVLNLQHNELSQLSDKTF: 119 : * ** * ** * * * * * ** * * * * * * * * : 7ytx_A_1 24:IAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXNGLNITDGAFLNLKNLRELLLEDNQLPQIPS---: 120 SecStr :EEE TTS SS TTS SSEEEEE SS EE TTTSTT TT EE TT S ----------- EE TTTTTT TT EEE SS SS S---: ExpBur :bbebeebebeebbeebeeebbebebbebebeebeeebbeebeebebbbbbebbee-----------eebebeebbbeebeebebbbbbebebeebbe---: queryA 120:AFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLEN-----------------------------LQELLLSNNKIQALKSEE: 190 : **** * * * * ** * * * * * * * *** * * : 7ytx_A_1 121:GLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFN-KVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNTQIKYISEED: 219 SecStr :S TT EEE SS EE HHHHTT TT EEE SSSSS -SS SS EE TTTTTT TT EEE S SS SS TT EEE SSS EE STT: ExpBur :ebbebbeebbbbebebeebeeebbbebeebebbebbbbbbee-eebeebebeebbbeebeebebbbbbbbbbeebbeebbeebeebebbbbebeebeeee: queryA 191:LDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL--NV: 288 : * * * ** * * ** * * * * * * ** * * * *** * * : 7ytx_A_1 220:FKGLINLTL--LDLSGN-----CPRCFNAPFPCVP-----CDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMP--HLKVLDLEFNYLVGEI: 305 SecStr :SSS TT E--EE TTS-----S SS SS ----- SSS EE TTTTSS TT EEE SS S TTTTTT S-- EEE SS HHHH: ExpBur :beebeebbb--bbbbbb-----bbbeeeeebeeee-----beeeeebebeeebbeebeebeebbbbbbbbeebbeebbeebe--ebebbbbbbbebeebb: queryA 289:VGNDSFAWLPQLEYFFLEYNNI-----QHL-FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFS-FQWLKCLEHLNMEDNDIPGIKSNMFTGLINL: 381 : ** ** * * * ** * * * * * * * *** * * * * * * * **: 7ytx_A_1 306:ASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHL-RGYVFQEL------REDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNL: 398 SecStr :HS SGGGS SS EEE S TT SB GGGTT TT EEE - S SEE------ GGGGGGGTT SS EEE TT EE GGGGTT SS : ExpBur :eebebbeebeebeebbbbbbeeeeeeeeebebbeebeebeebebbbb-bbbbbbeb------eeebbebbbebeebbbbbbbbbebeebebebbeebeeb: queryA 382:KYLSL---------------------------------------SNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNE: 442 : * ** * * * * * * * * * * * * : 7ytx_A_1 399:EIIYLSENRISPLVKXXXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKA----LDLSLNSIFFIGPNQFENLPDIACLNLSANS: 494 SecStr : EEE TTS ------------------------- SSS SSS S SS HHHHTTS E----EE SS SS TTSSTT SEEE SS : ExpBur :eebbbbebebebeee-------------------------eeeeeeebbeeeebbeeebeeeeeb----bbbbebebeebbeebbeebbebbbbbbbebe: Contact : bb queryA 443:IGQELTGQEWRGLENIFEIYLSYNKYLQLTRN--SFALVPSLQRLMLRRV----------ALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM-LEGL: 529 : * * * * *** ** * * * * * * * ** * ** *** * ** : 7ytx_A_1 495:NAQVLSGTEFSAIPHV--------KYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESK: 586 SecStr : B S TTTTS --------SEEE SB B STTTTTT TT EEE SB S TTTSS GGGGS SS EEE SS S S S: ExpBur :bebebebebbeebeeb--------ebbbbbebebbbbeeebbbbbeebebbbbbebebeeeeeeebbbbebbeebeebeebbbbebebebbeeeeebebe: Contact : bb b queryA 530:EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVF----KDLFELKIID---------------------------------: 592 : * * * ** * *** * * * * ** * * * ** * * : 7ytx_A_1 587:SLVELV-FSGNRLDILW-NDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDS: 684 SecStr :S EEE- SS HHHHH-T TT TTSSSSTT TT EEE SS S HHHHTTS TT SEEE SS S GGGGGG SS EEE SS S : ExpBur :bbeebb-bbbbebbebb-ebeeeebbbbbebbeebebbbbbebebeebeeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeebbee: queryA 593:------------LGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF-GPAFRNLTELDMRFNPFDCTCESIAWFVNWINE-THTNIPELSSHYLCN: 678 : * * ** *** * * ** * * * *** *** * * * * ** * * : 7ytx_A_1 685:LSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCD-IGDFRRWMDEHLNVKIPRLVD-VICA: 782 SecStr :TTTT SS EEE SS SSSSSSS SEEE SS SSSS SS EEE S B SSG-GGTHHHHHHH TTSB TTS- B : ExpBur :bbebbebbeebbbbebebeebbeebbbeebbbeebbbbebebeebeeebbeeeeebebeebbbbebebebeee-bbebeebbeebeebebbebbe-bebe: queryA 679:TPPHYHG: 685 : * *: 7ytx_A_1 783:SPGDQRG: 789 SecStr :SSTTT S: ExpBur :ebeeeee: |