Protein Model on 6zjz_A_1_S_1 (TEMPLATE: 6zjz )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [737 aa] Toll-like receptor 8 :TLR8_HUMAN
2 b S 1 (B) non-polymer(QLH) 5-[(3~{R},5~{S})-3-azanyl-5-(trifluoromethyl)piperidin-1-yl]quinoline-8-carbonitrile 420S(F) 421K(F) 442E(S) 444G(A) (identity: 0.0 %/30.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6zjz_A_1 identity=30.9%
queryA        34:VADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS--------------KLEPELCQKLPMLKVLNLQHNELSQLSDKTF: 119
                : * **   *  **       * * *  *         *     **      *                          *  *  * *  * * *      :
6zjz_A_1      20:IAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNXXXXXXXXXXXXNGLNITDGAFLNLKNLRELLLEDNQLPQIPS---: 116
SecStr          :EEE  SS  SS  S   TT  EEE  SS   EE TTSSTT TT  EEE  S   ------------   EE TTSSTT TT  EEE  SS  SS  S---:    
ExpBur          :bbebeebebeebbeebbeebeebebbebebeebeeebbeebeebeebbbbebee------------eebebeebbbeebeebeebbbbebebeebbb---:    

queryA       120:AFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLEN-----------------------------LQELLLSNNKIQALKSEE: 190
                :     **** *  * *  *         **  * *  *     *       *                              *  * ***  *     * :
6zjz_A_1     117:GLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFN-KVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNTQIKYISEED: 215
SecStr          :S  TT SEEE  SS   EE HHHHTT TT SEEE  SSBSSS-SS    EE TTTTTT TT  EEE  SB  SS  SS  TT  EEE TTS   EE TTS:    
ExpBur          :ebbeebeebbbbbbebeebbeebbbebeebebbbbbbbbeee-eebeebebeebbbeebeebebbbbbbbbbeebbeebbeebeebebbbbebeebeeee:    

queryA       191:LDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL--NV: 288
                :     *  *  * ** *      * ** *              * *           *  * * **   *       *       *  ***  * *    :
6zjz_A_1     216:FKGLINLTL--LDLSGN-----CPRCFNAPFPCVP-----CDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMP--HLKVLDLEFNYLVGEI: 301
SecStr          :STT TT  E--EE TTS-----S  SSS SS    ----- GGG   EE TTTTSS TT  EEE  SS  S   GGGGTT T--T  EEE  SS  HHHH:    
ExpBur          :beebeebbb--bbbbbb-----bbbeebeebeeee-----beeeeebebeeebbeebeebeebbbbbbbbeebeeebbeebe--ebebbbbbbbebbebb:    

queryA       289:VGNDSFAWLPQLEYFFLEYNNI-----QHL-FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFS-FQWLKCLEHLNMEDNDIPGIKSNMFTGLINL: 381
                :        ** **   *  * *     **   *     *   * * * *    *          ***     *  *   *   * *  *    *    **:
6zjz_A_1     302:ASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHL-RGYVFQEL------REDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNL: 394
SecStr          :HS SGGGG TT  EEE TT   TT   SB    GGGGG TT  EEE -TT   SEE------ TTTTGGGGG TT  EEE  S   SEE GGGGGG SS :    
ExpBur          :eebebbeebeebeebbbbbbeeeeeeeeebebbeebeebeebebbbb-bbbbbbbb------eeebbebbbebeebbbbbbbbbebeebebebbeebeeb:    

queryA       382:KYLSL---------------------------------------SNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNE: 442
                :    *                                       **     * *               * *  * *  *    *  *     * *  * :
6zjz_A_1     395:EIIYLSENRISPLVXXXXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKA----LDLSLNSIFFIGPNQFENLPDIACLNLSANS: 490
SecStr          : EEE TTS      --------------------------  TTS SSS  S SS HHHHTTS E----EE  SSS SS  TTTTTT    SEEE  SS :    
ExpBur          :ebbbbbebebebee--------------------------eebeeeebbeeeebbeeebeeeeeb----bbbbebebeebbeebbeebbebbbbbbbebe:    
Contact         :                                                                             bb                    b

queryA       443:IGQELTGQEWRGLENIFEIYLSYNKYLQLTRN--SFALVPSLQRLMLRRV----------ALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM-LEGL: 529
                :  * * * *               *** ** *   *     *  *    *              *       *   **  * ** ***    *   **  :
6zjz_A_1     491:NAQVLSGTEFSAIPHV--------KYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESK: 582
SecStr          :   B  S TTTTSTT --------SEEE  SS  B  STTTTTT TT  EEE  S   SS  S   B  GGGGG SS  EEE TT     B S  S EES:    
ExpBur          :bebebeeebbeebeeb--------ebbbbbebebbbeebebbebbeebbbbbbbebebeeeeeeeebbbebbeebeebeebebbebebebbeebebbebe:    
Contact         : b                                                        bb                                        

queryA       530:EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVF----KDLFELKIID---------------------------------: 592
                :   *      * *  **        *   ***  *  * *  *    ** * *      * ** * *                                 :
6zjz_A_1     583:SLVELV-FSGNRLDILW-NDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDS: 680
SecStr          :S  EEE- TTS HHHHH-T TT TTTTTTTEETT  EEE TTS  S   HHHHHTS TT SEEE  SS      GGGGGG TT  EEE  SS      TT:    
ExpBur          :bbeebb-bbbbbbbebb-ebeeeebbebbebbeebeebbbbebebeebeeebbebbbebbbebbbbebebeebebebbeebeebebbbbeebebeebbee:    

queryA       593:------------LGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRN-LTELDMRFNPFDCTCESIAWFVNWINE-THTNIPELSSHYLCN: 678
                :            *  *    **        *** * *  **                *  *    *** ***  *  *  *  *     ** *     * :
6zjz_A_1     681:LSDFTSSLRTLLLSHNRISHLPSGFXXXVSSLKHLDLSSNLLKTINXXXXXXXXTTKLSMLELHGNPFECTCD-IGDFRRWMDEHLNVKIPRLVD-VICA: 778
SecStr          :HHHH SS  EEE  SS      TT --- TT  EEE  SS  S   --------     EEE TT  EE STT-HHHHHHHHHH TTSB   GGG-SBEE:    
ExpBur          :beebbebbeebbbbebebeebbeee---eebbebbbbbebebeebe--------eeebeebbbbebebebeee-bbebeeebeeeeebebbebbb-bebe:    

queryA       679:TPPHYHG: 685
                : *    *:
6zjz_A_1     779:SPGDQRG: 785
SecStr          :ESTTTTT:    
ExpBur          :eeeebee:

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