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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [709 aa] | Toll-like receptor 13 :TLR13_MOUSE | |
2 | b | N 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 201K(H) 227F(N) 249S(K) 250I(S) (identity: 0.0 %/31.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4z0c_A_1 identity=31.0% |
queryA 42:LTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNN: 141 :** * * * ****** ** ** * * * * * * * * *** * * * * * * * * : 4z0c_A_1 26:LTEAISDIPRYTTHLNLTHNEIQVLPPWSFTNLSALVDLRLEWNSIWKIDEGAFRGLENLTLLNLVENKIQSVNN-SFEGLSSLKTLLLSHNQITHIHKD: 124 SecStr :HHHHHTTS TT EEE SS EE TTTTTT TT EEE SS EE TTTTTT TT EEE SS EE S- TT TT EEE SS EE TT: ExpBur :beebbeebbeebeebebbebebeebeeebbeebeebebbebeebebeebeebbbeebeebeebbbbebebeebee-bbebbeebebbebbebebeebeee: queryA 142:PFVKQKNLITLDLSHNGLS--STKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTE: 239 : * * * ** * * * * * * * * ** * * ** * * * * * * * : 4z0c_A_1 125:AFTPLIKLKYLSLSRNNISDFSGILEAVQHLPCLERLDLTNNSIMYLDHSPRSLV---SLTHLSFEGNKLRELN---FSALSLPNLTNLSASRNGNKVIQ: 218 SecStr :TTTT TT EEE SS HHHHHHHHTT SS EEE SS S EE S---S EEE TTS S EE--- TTEE TT EEE S SS B : ExpBur :bbebbeebeebbbbebebeebeebbebbbebeebeebebbebebeebbeeebebe---ebbebbbebbebebbb---bebbebeebbebbbbebeeeebe: Contact : b b queryA 240:KLCLE-LANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV------VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS: 332 : * * *** * * * * * * ** ** ** * * * * : 4z0c_A_1 219:NVYLKTLPQLKSLNLSGTVIKLENLSAKHLQNLRAMDLSNWELRHGHLDMKTVCHLLGN-----LPKLETLVFQKNVTNAEGIKQLAKCTRLLFLDLGQN: 313 SecStr : EE TT TT EEE TT B GGGS GGGGTT EEE SSGGG HHHHHHHHTT----- TT EEE SS HHHHHHHHHH SEEE TT : ExpBur :ebebebbeebeebebbbbebebeebebeebeebebbbbbbeeeeeeebebeebbebbee-----beebeebbbbebbbeeebbeebbeebebeebbbbeb: Contact : bb queryA 333:FTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGH: 432 : * * * * * ** * * ** * ** * * * * * * * * *** * : 4z0c_A_1 314:--------SDLIYLNDSEFNALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHN--KFKSFPDFAFSPLKH--LEFLSLSRNPITELNNLAFSGLFA: 401 SecStr :--------TT EE S TTTT TT SEEE TTS EE TTTSTT TT EEE SS-- S TTTTTT TT-- EEE TT S GGGGTT TT: ExpBur :--------eebeebeeebbeebebbeebbbbebebeebbeebbeebeebebbbbbeb--ebeebeeebbbbbee--beebbbbebbbeebeeebbebbee: queryA 433:LEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKL: 532 :* * * * * * * * * ** * * ** * * * ** *** * *****: 4z0c_A_1 402:LKELNLAACWI-VTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKILE--PNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLEKL: 498 SecStr : EEE TTS - TTSSTT TT EEE TTS EE TTTTTT TT EEE TTS EE --TTTTTT TT EEE SS TTTTTT TT : ExpBur :beebbbbbbeb-eebeeebbeebeebeebebbebebeebeebbbeebeebeebebbebebeebe--eebbbbbeebebbbbbebbbeebeeebbeebeeb: queryA 533:EILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLN--------------NLNTLP--------------AS: 604 : ** * * * ** * * * * * * * * ** * ** * **: 4z0c_A_1 499:LILKLGFNKITYETTRTLQYPPFIKLKSLKQLN-LEGQRHGIQVVPSNFFQGLGSLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSLYLNAS: 597 SecStr : EEE SS BSS SS TTTT TT EEE- TT TT EE TTTTTT TT EEE TT S EEE S TTTT TT EEE SHHHHEEE TT: ExpBur :eebebbebebebeeeeebeebbbeebeebeebb-bbbbeebbbbbbebbbeebebbeebbbbebebbebeeebbeebeebebbbbbbbeebeebbebbee: queryA 605:VFNNQVSLKSLNLQKN--------LITSVEK-KVFGPAFRNLTEL--------------DMRFNPFDCTCESIAWFVNW-INETHTNIPELSSHYLCNTP: 680 : * * ** * * * * ** * ** * * *** ** ** * ** * * * * *: 4z0c_A_1 598:LFQNLKRLKILRLENNNLESLVPDMFSSLQSLQVFSLRFNNLKVINQSHLKNLKSLMFFDVYGNKLQCTCDNL-WFKNWSMNTEEVHIPFLRS-YPCQQP: 695 SecStr :TTTT TT EEE SS S TTSSTT TT EEE SS TTTTTT TT EEE TTS SSGGGH-HHHHHHHH SS B TTGGG- B SST: ExpBur :bbeebeebebbbbeebebeebeeebbbebeebebbbbeebbbeebeeebbeebeebebbbbeebebebeeebb-ebbeebeebeebbbbbbee-bebeee: |