Protein Model on 8suf_A_1_J_1 (TEMPLATE: 8suf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR3_HUMAN) A 1 (A) polymer(polypeptide(L)) [939 aa] TIR domain-containing protein :Q9N5Z3_CAEEL
2 b J 1 (J) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 108H(Y) 132S(H) 156H(S) 180N (identity: 25.0 %/29.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8suf_A_1 identity=29.6%
queryA        49:LPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFC-TNLTELHLMSNSIQKIKNNPFVKQK: 147
                :**      **  * * * * *       *  * *  * *           * *  *    * *  *       *      ***  ***            :
8suf_A_1     264:LPGTVVHVNLAGNALKRVPDA-VAELASLVALNVSRNEIEAGNSSVFSS-PELEMLDASYNKLDSLPVEWLQKCEKRIAHLHLEHNSIEQLTGGVLANAT: 361
SecStr          :  TT  EEE TTS  SS  HH-HHT SS  EEE  SS   SSS      -S   EEE  SS  SS  TTTGGG TTT  EEE  SS      TTSSTT S:    
ExpBur          :bbeebeebbbbebebeebbeb-bbebeebebbebbebebebeeebebeb-eebeebbbbebebeebbeebbeebeeebbebbbbebebeebeeebbeebe:    
Contact         :                                                           b                        b               

queryA       148:NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELAN: 247
                :** ***** * *                * ****    *    *       *  * ** *   *       ***      *  * *      *      *:
8suf_A_1     362:NLQTLDLSSNQLRVFRDEVLPENSKIGNLRLSNNSLELLEPSSL---SGLKLESLDLSHNKLTEVPA----AIGKVEQ--LKKVDLSHNRIAKVYQYVLN: 452
SecStr          :S  EEE  SS  SEE STTS TT    EEE  SS   EE TTTT---TT   SEEE  SS  SS  G----GGGS S --  EEE TTS      TTTTT:    
ExpBur          :ebebbbbbbbebebbeeebbbeebebbebebbebebeebeeebb---eebebeebebbebebeebbe----bbeebee--beebebbebebeebeeebbb:    
Contact         :        b                       b                                                                   

queryA       248:--TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPK: 345
                :         *** **       *       *  ** * *       * **  * *       * *  *    *      * *               ** :
8suf_A_1     453:KIKQLHTVDLSNNQLQSIGPYIF--SDSSELHSLDVSNNEISLLFKDAFARCPKLRKISMKMNKIKSL-DEGLTEASGLRRLDVSHNEI-LVLKWSALPE: 548
SecStr          :S SS  EEE TTS    B TTSS--SS TT  EEE  SS    B TTTT S TT  EEE  SS     -TTTTSS TT  EEE  SS  - SB STTS S:    
ExpBur          :ebeebeebebbebebeebeeebb--bebeebeebbbbebebeebeeebbeebeebeebbbeebebeeb-eebbeebebbeebbbbebeb-eebebebbbe:    

queryA       346:IDDFSFQWLKCLEHLNMEDNDIPGI-KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLN: 441
                :           ** **   ***       *     ***  ****      *  *          *  *    *   *    *      *  * *  *:
8suf_A_1     549:N----------LEILNADNNDINLLTAASMSPSTANLKSVSLSNNGI---TIMNADQIP---NSLESLDVSNNRLAKLGKTALAAKSQLRRLNLKGN: 629
SecStr          :S----------  EEE  SS    B  SSS STTTT  EEE  SS  ---    TTTS ---TT SEEE TTS      TTTTTS TT  EEE TT :    
ExpBur          :e----------beebebbebebeebeebeebebbeebeebbbbebbb---eebeeebbb---ebbeebebbebebeebbeebbbebeebeebbbeeb:

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