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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR3_HUMAN) | A 1 (C) | polymer(polypeptide(L)) [661 aa] | Toll-like receptor 3 :TLR3_MOUSE | |
2 | b | I 1 (I) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 272K 273W 274T 275N 298P 299Q(S) (identity: 83.3 %/77.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7wm4_A_1 identity=77.8% |
queryA 28:CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTE: 127 :*** ********** ***** **************** ******** ** *** ********** ** ************* ** ** *******: 7wm4_A_1 4:CTVRYNVADCSHLKLTHIPDDLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTE: 103 SecStr : SSB S S S S SEEE SS S SSTTSS SEEE S THHHHH SEEE S GGGGSS S E: ExpBur :eeeeeeebbbeeeebeebeeebeeebeebbbbebebeebbeeebeebeebeebebbebebeebbbebbeebeebeebbbeebebeeeeeebbeebeebeb: queryA 128:LHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLF: 227 :* ****** *** *** ***** *************** *********** *** ** **** **** ** **** ******** ** ** * : 7wm4_A_1 104:LDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALL: 203 SecStr :EEESS S TTSS S EEEE SS SS B TT EEE S EE HHHHTTB S EESEEE TT EE TTTTTSSSEE EEE: ExpBur :bbbebbebeeeeeebbeebeebeebbbbebebeebebbeeebbeebebbbbbebebebbeeebbebbeebebeebbbbebebeebeeebbeebeebbbbe: queryA 228:LNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL: 327 :*** ** * ****** ** **** **** * ** ** ** ******** ******** *** ** ** * * ******* * * ** * ***: 7wm4_A_1 204:LNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYL: 303 SecStr : TTS HHHHHHHHHHTTTS EEE SS EE TTSSGGGGGS EEE TTS EE TTTTTT SS EEE S EE TTTTTT S EE: ExpBur :beebebeeebbeebbebbbebebeebbbbebebeebeeebbbbbeebebeebebbebebeebeebbbbebeebeebbbeebebeebbeebbeebeebeeb: Contact : bbbb bb queryA 328:NLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAF: 427 : *** *** * * ********** ** *** ** ** *** **** ******* **** *************** ****** **** *: 7wm4_A_1 304:SLKRAFTKXXXXXXSHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTF: 403 SecStr :E TT S ------ EE TTSSSS TT EEE S B TTSSTT S EEE TT BSS SEE TTTT GGGSS SEEE TTS EE TTTT: ExpBur :bbeebbbe------eebebeeebbeebeebeebbbbebebbebeeebbeebeebeebbbbebbeebeebeeebbebbeebebeebebbebebeebeebbb: queryA 428:SWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLE: 527 :**** * ******** * * ******* *************** ********************** ***** ******************* * **: 7wm4_A_1 404:SWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLE: 503 SecStr :SS TT EEE SS EEE SGGGTT S EEE S SEEE TTSSSS TT SEEE TT B SSS TTTT S EEE SS TTTTT: ExpBur :eebbebeebbbbebebebebebebbeebeebeebebbebeebbbbeebbeebeebeebbbeebebeebeeeebbbeebeebbebbbbebebeebeeebbe: queryA 528:GLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEK: 627 :*** ***** ********* ***** ***************** ***** *** ***** * ******* * * * ** **************: 7wm4_A_1 504:GLENLEILDFQHNNLARLWXXXNPGGPVNFLKGLSHLHILNLESNGLDEIPVGVFKNLFELKSINLGLNNLNKLEPFIFDDQTSLRSLNLQKNLITSVEK: 603 SecStr :T TT EEE TT STT --- TT STT TT EEE TTS SSSSTT TT EEE SS TTS SS TT EEE TTS H: ExpBur :ebeebeebbbbebebbebb---eeeeebebbeebeebeebbbeebebeebbeebbeebeebebbbbbebebeebeeebbebbeebeebbbbebebeebee: queryA 628:KVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSCK: 697 : **** * ** *************** ******* ***** *** ******* ** *** ********: 7wm4_A_1 604:DVFGPPFQNLNSLDMRFNPFDCTCESISWFVNWINQTHTNISELSTHYLCNTPHHYYGFPLKLFDTSSCK: 673 SecStr :HHHTGGGSS EEE S EE STTTTHHHHHHHHT EETTTTTS EEESSTTTT SSS TT : ExpBur :ebbbebbeebeebbbbebebebeeebbbebbebbeeeebebeebeeebebeeeeeeeeeebeebebeeee: |